Bradyrhizobium japonicum USDA 6: BJ6T_04270
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Entry
BJ6T_04270 CDS
T01848
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bju
Bradyrhizobium japonicum USDA 6
Brite
KEGG Orthology (KO) [BR:
bju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bju03016
]
BJ6T_04270
Enzymes [BR:
bju01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BJ6T_04270
Transfer RNA biogenesis [BR:
bju03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BJ6T_04270
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
BAL05725
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All DBs
Position
complement(450192..450728)
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AA seq
178 aa
AA seq
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MPRLFTGLEIPAEIGQTLSNLRGGLPGARWIDPENYHVTLRFIGDIDGMSANEIASMLFR
VDRKPFEVKVQGLTSFGGRKPRAVVATIAPSKPLMELQAELERMMQRIGLDPEGRKFTPH
VTLARLHDASDRDVADYLSLRGYFPSKAFMAERFVLFSSRASTGGGPYVVEDAYELCE
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtttgttcacaggtctggaaattccggccgagatcggccagacgctttccaat
ttgcggggcggccttcccggcgcccgctggatcgatcccgaaaattatcatgttaccctg
cgcttcatcggcgatatcgacggcatgtccgccaacgagatcgcgtcgatgctgtttcgc
gttgatcgcaagcccttcgaggtgaaggtgcaggggctcacgagcttcggcggccgcaag
ccgcgcgcggtggtcgcgaccatcgcgccgagcaagccgctgatggaattgcaggccgag
ctcgaacgcatgatgcagcggatcggcctcgatcccgaaggccgcaagttcaccccgcat
gtcacgctggcccggctgcacgacgcgtccgaccgcgacgtcgccgactatctctcgctg
cgcggttacttcccgagcaaggcgttcatggccgaacgttttgtcttgttctcgtcacgc
gcatcgaccggcggcggcccctatgtggtcgaggacgcctacgagctgtgtgagtga
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