Bradyrhizobium japonicum USDA 6: BJ6T_04460
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Entry
BJ6T_04460 CDS
T01848
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bju
Bradyrhizobium japonicum USDA 6
Pathway
bju00300
Lysine biosynthesis
bju00470
D-Amino acid metabolism
bju01100
Metabolic pathways
bju01110
Biosynthesis of secondary metabolites
bju01120
Microbial metabolism in diverse environments
bju01230
Biosynthesis of amino acids
Module
bju_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bju00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BJ6T_04460
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BJ6T_04460
Enzymes [BR:
bju01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BJ6T_04460
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Response_reg
Motif
Other DBs
NCBI-ProteinID:
BAL05744
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Position
complement(470347..471222)
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AA seq
291 aa
AA seq
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MSALANHAFAKMNGIGNEIVVVDMRDSAAPVTPDDARAVASAPGGVPYDQLMVLRKPRFD
GTEAFISIYNNDGSEAGACGNGMRCVVRRIFEKTGQTTATFETAAGLLNCWQGPAPDLYT
VDMGAPKFGWQEIPLAEEFRDTRYIELQIGPIDNPILHSPSVVSMGNPHAIFWVEDVNGY
DLERFGPLLENHPIFPERANITLAHIVDRDHVTIRTWERGAGLTRACGSAACATAVAAAR
LKRTERNVEITLPGGKLEIEWRESDDHVLMTGPATFEYEGSFDPALFAPVG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctctggccaaccacgcatttgccaagatgaacggcatcggcaacgagatcgtc
gttgtcgacatgcgtgattccgccgcgccagtgacgccggatgacgcccgcgcggtcgcg
tccgcgccgggcggcgtgccctatgaccagctcatggtgctccggaagccgcggttcgac
ggtaccgaggccttcatcagcatctacaacaatgacggctccgaggccggcgcctgcggc
aacggcatgcgctgcgtggtgcggcgtatcttcgagaagaccgggcagaccacggcaacg
ttcgagaccgctgcgggcctgctcaactgctggcagggcccggcgcccgatctctatacc
gtcgatatgggcgcgccgaagttcggctggcaggagattccgctggcggaagagtttcgc
gacacccgctacatcgaattgcagatcgggccgatcgacaatccgatcctgcattcgccc
tcggtggtgagcatgggcaatccgcatgcgatcttctgggtcgaggacgtcaacggctac
gatctcgagcgttttggtccgctgctggaaaatcacccgatcttccccgagcgcgccaac
atcacgctcgcccatatcgtcgatcgcgaccacgtcacgatccgcacctgggagcgtggc
gcgggcctgaccagagcttgcggttcggcggcgtgcgcgaccgcggtcgcggccgcgcgg
ctgaagcgcaccgagcgcaatgtcgagatcacgctgcccggcggcaagctcgaaatcgaa
tggcgggaaagcgacgaccacgtgctgatgacgggccccgcgaccttcgagtatgagggc
tccttcgatccggcgctgttcgcgccggtcggctga
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