Bradyrhizobium japonicum USDA 6: BJ6T_04840
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Entry
BJ6T_04840 CDS
T01848
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
bju
Bradyrhizobium japonicum USDA 6
Pathway
bju00020
Citrate cycle (TCA cycle)
bju00190
Oxidative phosphorylation
bju00650
Butanoate metabolism
bju00720
Other carbon fixation pathways
bju01100
Metabolic pathways
bju01110
Biosynthesis of secondary metabolites
bju01120
Microbial metabolism in diverse environments
bju01200
Carbon metabolism
Module
bju_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bju_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bju_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
bju00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BJ6T_04840
00650 Butanoate metabolism
BJ6T_04840
09102 Energy metabolism
00190 Oxidative phosphorylation
BJ6T_04840
00720 Other carbon fixation pathways
BJ6T_04840
Enzymes [BR:
bju01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
BJ6T_04840
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
DAO
GIDA
HI0933_like
Thi4
Motif
Other DBs
NCBI-ProteinID:
BAL05782
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Position
502790..504625
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AA seq
611 aa
AA seq
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MANATNGKGNGAPATNGKAYPIEDHTYDVVVVGAGGAGLRAVVGCSEAGLRTACITKVFP
TRSHTVAAQGGISASLGNMHKDDWRWHMYDTVKGSDWLGDQDAIEYMVRNAPEAVYELEH
WGVPFSRTEDGKIYQRPFGGMTTEFGKSQAQRTCAAADRTGHAMLHTMYGQSLRHAAEFF
IEFFAIDLIMDDQGTCRGVIALRLDDGTLHRFRAQTVILATGGYGRAYASCTSAHTCTGD
GGGMVLRAGLPMQDMEFVQFHPTGIYGSGCLVTEGARGEGGYLVNSEGERFMERYAPSAK
DLASRDVVSRAMTIEIREGRGVGKKKDHIFLHLDHLDPAVLAERLPGISESAKIFANVDV
TREPIPIVPTVHYNMGGIPTNYHGEVLTKRDGDDNAIIPGLMAIGEAACVSVHGANRLGS
NSLIDLVVFGRAAALRLAEKLTPNAKQPELPANSSELALGRLDHYRYASGGTPTAKLREG
MQHVMQNNCAVFRTGEVLSEGQNLIEKVHSGITDIAVSDRSLVWNSDLIETLEFDNLISQ
AVVTMDSAANRTESRGAHAREDFSARDDKNWMKHTLAWLDDKGKVKIEYRPVHDYTMTND
VQYIPPKARVY
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcgacgaatggcaagggcaacggcgctcccgccaccaacggcaaagcctat
ccgatcgaagaccacacctatgacgtcgtcgtggtcggcgccggcggcgcgggcctgcgc
gccgtggtcggctgcagcgaagccggtcttcgcaccgcctgcatcaccaaggtgtttccg
acccgctcgcatacggtcgcggcgcagggcggcatctcggcctcgctcggcaacatgcac
aaggacgactggcgctggcacatgtacgacaccgtgaaggggtcggactggctgggtgac
caggatgcgatcgaatacatggtgcgcaacgcgcccgaggccgtctacgagctcgaacat
tggggcgtgccgttctcgcgcaccgaggacggcaagatctaccagcgtccgttcggcggc
atgacgaccgagttcggcaagagccaggcgcagcgcacctgcgccgccgccgaccgcacc
ggccacgccatgctgcacacgatgtatggccagtcgctgcgtcacgcggccgagttcttc
atcgagttcttcgccatcgacctgatcatggacgaccagggcacctgtcgcggcgtcatc
gcgctcagattggacgacggcacgctgcaccgcttccgcgcccagaccgtgattctcgcc
accggcggctacggccgtgcctacgcctcctgcacctcggcgcacacctgcaccggcgac
ggcggcggcatggtgctgcgcgccggcctgccgatgcaggacatggagttcgtgcagttc
cacccgaccggcatttacggttcgggctgtctcgtcaccgaaggcgcgcgcggcgaaggc
ggctatctcgtcaattccgagggcgagcgcttcatggagcgctatgcgccgtccgcgaag
gacctcgcctcgcgcgacgtcgtctcgcgcgcgatgaccatcgagatccgcgaaggccgc
ggcgtcggcaagaagaaggaccacatcttcctgcatcttgaccatctcgatcccgcggtg
ctcgccgagcgcctgccgggcatctccgaatccgcaaaaatcttcgccaatgtcgacgtg
acgcgcgagccgatcccgatcgtgccgaccgtgcactacaacatgggcggcatccccacg
aactatcatggcgaagtgctgaccaagcgggatggcgacgacaacgccatcatccccggc
ctgatggcgatcggcgaagcggcttgcgtctccgtgcacggcgccaaccgcctcggctcc
aactcgctgatcgacctcgtggtgttcggccgcgccgcagcgctccgtctcgcggagaag
ctcacgcccaacgccaagcagcccgagctgccggcgaactcgtccgagctcgcgctcggc
cgcctcgaccattaccgctacgcctccggcggcacgccgaccgcgaagctgcgcgaaggc
atgcagcacgtgatgcagaacaattgcgcggtgttccgcaccggcgaggtgctcagcgaa
ggccagaacctcatcgagaaggtccacagcggcatcaccgacatcgcggtgtccgaccgc
tcgctggtgtggaattccgacctgatcgagacgctggagttcgacaatctgatctcgcag
gcggtggtgacgatggactccgccgccaaccgcaccgagagccgcggcgcgcatgcccgc
gaggacttctccgcgcgcgacgacaagaactggatgaagcacacgctggcctggctcgac
gacaagggcaaggtcaagatcgagtaccgccccgttcacgactacaccatgaccaacgac
gtgcagtatatcccgcccaaagctcgcgtttactga
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