Bradyrhizobium japonicum USDA 6: BJ6T_07480
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Entry
BJ6T_07480 CDS
T01848
Name
(GenBank) helicase 2
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
bju
Bradyrhizobium japonicum USDA 6
Brite
KEGG Orthology (KO) [BR:
bju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bju03400
]
BJ6T_07480
Enzymes [BR:
bju01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJ6T_07480
DNA repair and recombination proteins [BR:
bju03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BJ6T_07480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BAL06041
LinkDB
All DBs
Position
complement(778474..781986)
Genome browser
AA seq
1170 aa
AA seq
DB search
MVKLPRPIPDEVRARQARASDPTASAFVSANAGSGKTHVLVQRVIRLLLSGVPPEKILCI
TFTKAAAANMAERVFTTLGHWVTLDDNALDAAIKAVGIPHPDRKLRREARKLFACALETP
GGLKVQTIHALCTRLLQQFPFEANVPARFAVIDERDQTDMMERANLKVLLEAARDPETVT
GRALLTAMASAADVTFKEVVREACLSRDHFMAWTDEAGNAEAAAAQMAAVLGVDASDRIE
DVEMEILDGPFLPRSRWDEVILALDGGNKTERDQGDCLRSAKAFSGSAQVDAYLGVFLTD
EKKQPRKTLLTKQFCKDYPSVAHLFEREAQRLDALIEKRRAVTVRDRTAALLHIATAAAA
NYRREKQERGLLDYDDLIDKTLAMLDRVSSGWVHFKLDRGVDHVLIDEAQDTSPRQWDIV
AHIISEFTAGEGAREGLTRTVFAVGDEKQSIFSFQGAQPREFDARRRELHRKFTAAGLKF
DPVAFTYSFRSGAAILHSVDHVFREPQIYKSIHSVEIGHPLHNALADAGPSVIELWDLAE
VDDRQEIEGWRAPFDGVAATSPEVKLARRIQTEIKQLVESGTLTGHEGERRPLRYGDMLI
LVRRRGNAFDAVIQALKHANVPVAGADRLKLTEHIAIIDLMNLADALLLPQDDLALAVAL
KSPLFGLDDDDLFQLAWGRKGSLRRALAEHAATSETFATALRRLEACEARSRDEPPFAFY
AWLLGGDGGRARILRRLGHEANDALDEFLELALNYERKAPASLQGFMAWLRSADTEVKRD
MEISRDEVRVMTVHGAKGLEASVVFMVDTTSSPADSQRVRLIHVPRGNGGEVVVWAGRKA
DDPKPVADARKAMIEETEDEYRRLLYVAMTRAADRLIVGGCMPGNMKTVRKLSWYDLIDT
GLTGSGLDKQTIETTLGKVTRFARPEDVAALGTPAMLEDQSIALPDWLRTPLPRESVDDD
PVRPSGQSAEEGRSVRSGESVQSRALALQRGTLVHRLLQSLPDIAPERRRDAALGFMVRN
APDWTEADRTGLAGKVLALIAEPRFAPVFAAGSRAEVSIVGRLDRPGRPPALVSGQIDRL
VVRPDEVLIVDFKTNQAAPKSAAEAPAAYVRQLALYRAVLARLYPQKPIRAVLLWTEALE
YMEISAPALDAALASLHVGVSVLDPARGRS
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctgccgcgtcccattcccgacgaggtgcgtgcgcggcaggcgcgcgcgtcc
gatccgacagcgtcggcgttcgtgtcggccaatgccggctcgggcaagacccatgtgctg
gtgcagcgcgtgatccgcctgctgctgtcgggcgtgccgccggaaaagatcctctgcatc
accttcaccaaggccgccgccgccaacatggccgaacgcgtgttcacgacgctcggccat
tgggtgacgctggacgacaacgcgctcgacgcggcgatcaaggcggtcggcatcccacat
cccgatcgaaaactacgccgcgaagcacgaaagctgttcgcatgcgcgctggagacgccg
ggcgggttgaaggtgcagaccatccatgcgttgtgcacccgcctcctccagcaatttccg
ttcgaggccaatgttcccgcgcgcttcgccgtgatcgacgagcgcgaccagaccgacatg
atggagcgtgccaatctgaaggtgctgctcgaagccgcgcgcgatccggagaccgtcacc
ggccgcgcgctgctcaccgcgatggcgagcgcggccgacgtcactttcaaggaggtcgtg
cgcgaggcctgtctcagccgcgatcatttcatggcctggaccgacgaggccggcaacgca
gaggctgccgccgcgcaaatggcggcggtgctgggcgttgatgcgagcgatcggatcgag
gacgtcgagatggaaattctcgatggcccattcctgccgcggtcgcgctgggacgaagtt
atccttgcactcgatggtggcaacaagaccgagagggatcaaggcgactgcttacgttcg
gcgaaggcgttctcaggcagcgcgcaagtggatgcttatcttggggtctttctcaccgat
gaaaagaagcaaccccgcaagacgttgctaactaaacaattttgcaaagattatccgtct
gtcgctcacctattcgagcgcgaggcgcagcggctcgacgctctgatcgagaagcgtcga
gccgtgacagttcgcgaccgcaccgcggccctgctgcacatcgcgaccgcggccgccgca
aactaccgccgtgagaagcaggagcgcgggctgctcgactacgacgacctcatcgacaag
acgctggcgatgctcgaccgcgtctcctcgggctgggtgcatttcaagctcgaccgcggc
gtcgatcacgttctgatcgacgaggcccaggacaccagcccgcggcaatgggacatcgtc
gcgcacatcatttcggagttcaccgccggtgaaggcgcacgcgaagggctgacccgcacg
gtcttcgccgtcggcgacgagaagcagtcgatcttctcctttcagggcgcccagccccga
gaattcgacgcgcgccggcgcgagctgcaccgcaagttcaccgccgccgggctgaagttc
gatccggtcgccttcacctattcgttccgttcgggcgcggcgatcctgcactcggtcgac
cacgtcttccgcgagccccagatctacaagagcatccattcggtcgagatcggccatccc
ctgcacaatgcgctcgccgatgcgggcccgagcgtgatcgagctgtgggatctcgccgag
gtcgatgacaggcaggagatcgagggctggcgcgcgccgttcgatggcgtcgccgccacc
agccccgaggtgaagctcgcccgccgcatccagaccgagatcaagcaactggtcgagagc
ggcacgctgaccgggcatgaaggcgagcgccgccccctgcgctatggcgacatgctgatc
ctggtgcgccggcgcggcaatgcgttcgacgccgtgatccaggcgctgaagcacgccaac
gttccggtcgccggcgccgaccggctgaagctgaccgagcacatcgcgatcatcgacctg
atgaatcttgcggacgcgctgctgctgccgcaggacgatctcgcgctcgcggttgcgctg
aagagccctctgttcgggcttgatgacgacgacctgtttcagctcgcctggggccgcaag
ggctcgctgcgccgcgcgcttgccgaacatgccgccacaagcgagacgttcgccacggca
ctgcggcggcttgaagcctgcgaggcgcggtcgcgcgacgagcctccgttcgccttctac
gcctggctgctcggcggcgacggcggacgcgcgcgcatcctgcgccggctcggccatgag
gctaacgacgcgctcgacgagtttctggagctggcgctgaattacgaacgcaaggcaccg
gcctcgctgcagggtttcatggcctggctgcgctcggccgacaccgaggtgaagcgtgac
atggagatctcgcgtgacgaggtgcgggtcatgaccgtgcacggcgccaagggcctcgaa
gcctccgtcgtgttcatggtcgacacgacatcatcgcccgcggattcgcagcgggtccgg
ctgatccacgtgccgcgcggcaatggcggcgaagtcgtggtctgggccgggcgcaaggcc
gatgatcccaagcccgtcgccgacgcacgcaaggccatgatcgaggagaccgaggacgag
tatcgccgcctcctctatgtcgcgatgacgcgcgcggccgatcggctgatcgtcggcggc
tgcatgcccggcaacatgaagacggtgcgcaagctgagctggtacgatttgatcgacacc
gggctcaccggctcgggcctggacaagcagacgatcgagacgacgctcggcaaggtgacc
cggttcgcccgtccggaggatgtcgcggcgctcggcacgcctgcgatgttggaagaccaa
tcgatcgcattgccggactggctgcggacgccgttaccgcgcgagagcgtcgatgatgat
cccgtgcgcccctccggccagtcggccgaggaaggccgtagcgtgcgatcaggcgaatcg
gtgcagtcgcgcgcgctggcgctgcagcgcggcacgctggtgcaccggctgctgcaatcc
ctccccgacatcgcccccgagcgccggcgcgacgccgcgcttggcttcatggtgcgcaac
gcgcccgactggacggaggccgaccggaccgggctggccggcaaggttctcgccctgatc
gccgaaccgcgctttgccccggtgtttgccgccggcagccgtgccgaggtctcgatcgtc
ggccgattggaccggccgggccggccgccagcgctggtgtcggggcagattgaccggctg
gtcgttcgtccggacgaggttctgatcgtcgatttcaagaccaaccaggcggcgcccaaa
agcgccgcggaggcgcccgccgcctatgtccggcagcttgcgctgtaccgggcggtgctg
gcgcggctttatccccaaaagccgatcagggcggtcctgctctggaccgaggcccttgaa
tacatggagatttcagcccccgcgctggacgcggcgctggcatcccttcatgtcggcgtg
agcgtccttgacccggcaaggggccgttcatag
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