Bradyrhizobium japonicum USDA 6: BJ6T_07830
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Entry
BJ6T_07830 CDS
T01848
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bju
Bradyrhizobium japonicum USDA 6
Pathway
bju03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bju00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BJ6T_07830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bju03019
]
BJ6T_07830
03016 Transfer RNA biogenesis [BR:
bju03016
]
BJ6T_07830
Enzymes [BR:
bju01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BJ6T_07830
Messenger RNA biogenesis [BR:
bju03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BJ6T_07830
Transfer RNA biogenesis [BR:
bju03016
]
Prokaryotic type
tRNA degradation factors
BJ6T_07830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
DUF5813
PCB_OB
aRib
Motif
Other DBs
NCBI-ProteinID:
BAL06076
LinkDB
All DBs
Position
complement(819911..822064)
Genome browser
AA seq
717 aa
AA seq
DB search
MFNKHSVEIDWGGRPLKLETGKIARQADGAVVATYGETVVLATVVAAKAPREGVDFLPLT
VDYQEKTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVDGWRNETQVIVTVLSH
DMENDPDIVALVASSAALTLSGAPFKGPIGAARVGFANDEFILNPTLDEMVDTQLDLVVA
GTADAVLMVESEAKELNEDIMLGAVMFGHRHFQPVINAIIELAEKAAKEPREVTVIDNSA
LEKEMLGLVEQELRAAYAIPVKQDRYAAVGKVKEKVIAHYFPEGQEPKYDKLRVSGVFKE
LEAKIVRWNILDTGKRIDGRDSKTVRNIIAEVGVLPRAHGSALFTRGETQALVVTTLGTG
EDEQYIDALSGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHH
EFPYTTRVVSEITESNGSSSMASVCGASLALMDAGVPLKRPTAGIAMGLILEDKRFAVLS
DILGDEDHLGDMDFKVAGTEAGITSLQMDIKIEGITEEIMKVALGQAKEGRIHILGEMAK
ALTNARAELGEYAPRIETFKIATDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVAS
SDGEAMKAAIKWIKSIASDPEVGQIYDGTVVKVMEFGAFVNFFGSKDGLVHISQLASARV
QKTSDVVKEGDKVKVKLLGFDDRGKTRLSMKVVDQATGEDLEGKGEGEKAPREAAGE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataagcattcagtcgagatcgactggggtggacgccctctcaagcttgaaacc
ggcaagatcgcgcgtcaggccgacggcgccgtcgtcgccacctatggcgagaccgtggtg
ctcgccaccgtcgtcgcggcgaaggcgccgcgcgaaggcgtcgacttcctgccgctgacg
gtcgactaccaggagaagacctacgcagccggccgcattcccggcggctatttcaagcgc
gagggtcgtccgaccgagaaggagacgctggtctcccgcctgatcgaccgtccgatccgt
ccgctgttcgtcgacggctggcgcaacgagacccaggtgatcgtcaccgtgctgtcgcac
gacatggagaatgatcccgatatcgtggcgctggtggcctcatcggccgcgctgaccctg
tccggcgcgcccttcaagggcccgatcggcgcagcgcgcgtcggcttcgccaatgacgag
ttcatcctcaacccgacgctcgacgagatggtcgacacccagctcgacctcgtcgtcgcc
ggcacggccgacgccgtgctgatggtggaatcggaagccaaggagctcaacgaggacatc
atgctcggcgccgtgatgttcggtcaccgccacttccagccggtgatcaacgccatcatc
gagctcgccgagaaggccgccaaggagccgcgcgaagtcacggtgatcgacaattcggcg
ctcgagaaggaaatgctcggcctcgtcgagcaggagctgcgcgccgcctacgccattccg
gtcaagcaggatcgctacgccgcggtcggcaaggtcaaggaaaaggtgatcgcccattac
ttccccgaagggcaggagccgaaatacgacaagctgcgcgtctcgggcgtgttcaaggag
ctggaagccaagatcgttcgctggaacattctcgacaccggcaagcgcatcgacggccgc
gatagcaagactgtgcgcaacattatcgccgaagtcggcgtgctgccccgcgcccacggc
tcggcgctgttcacccgcggcgagacccaggcgctggtcgtgaccacgctcggcaccgga
gaggacgagcagtatatcgacgcgctgtccggaacgtacaaagagacgttcctgctgcac
tacaacttccctccctactcggtcggtgagaccggtcgcctcggcggcaccaagcgccgc
gagatcggccacggcaagctggcctggcgcgcgatccacccggtgctgccgccgcatcac
gagttcccctacaccacgcgcgtggtgtcggagatcaccgagtcgaacggttcgtcctcg
atggcttcggtctgcggcgcttcgctcgcgctgatggatgcgggcgtgccgttgaagcgg
ccgaccgcgggtatcgcgatgggcctgatcctcgaagacaagcgcttcgcggtgctctcg
gacatcctcggtgacgaggatcatctcggcgacatggacttcaaggtggccggcacggaa
gcgggcatcacctcgctccagatggacatcaagatcgagggcatcaccgaggagatcatg
aaggtcgcgctcggtcaggccaaggaaggtcgtatccacatcctcggcgaaatggccaag
gcgctcaccaacgcccgcgccgagctcggcgaatacgcgccgcgcatcgagaccttcaag
atcgccaccgacaagatccgcgaagtgatcggcaccggcggcaaggtgatccgcgagatc
gtcgagaagaccggcgccaaggtcaacatcgaggacgacggcaccgtgaaggtcgcctcc
agcgacggcgaggcgatgaaggccgcgatcaagtggatcaagtcgatcgcgtccgatccg
gaagtcggccagatctatgacggcaccgtcgtcaaggtgatggagttcggcgccttcgtg
aacttcttcggctccaaggacggcctcgtccacatcagccagctcgcttcggcgcgcgtg
cagaagacctccgacgtcgtcaaggaaggcgacaaggtcaaggtcaagctgctcggcttc
gacgaccgcggcaagacccggctgtcgatgaaggtggtcgaccaggccaccggcgaagac
ctcgagggcaagggcgagggcgagaaggccccgcgcgaagccgccggcgagtaa
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