KEGG   Bradyrhizobium japonicum USDA 6: BJ6T_18710
Entry
BJ6T_18710        CDS       T01848                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
bju  Bradyrhizobium japonicum USDA 6
Pathway
bju03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bju00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BJ6T_18710
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bju03400]
    BJ6T_18710
DNA repair and recombination proteins [BR:bju03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BJ6T_18710
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BJ6T_18710
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 UB2H AAA_22 AAA_16 SWI2_SNF2 Kinesin Microtub_bd DUF2963 DUF87
Other DBs
NCBI-ProteinID: BAL07152
LinkDB
Position
complement(1944402..1947290)
AA seq 962 aa
MQPIGPALAELLNPAINRGDAGLGSGTGLQPPPDNSRDRRAGGEAAAHRARASTPKEFPQ
DTTRPMPLRPNPQPPGARASESGGFDEAPQANYGTAATIPTLDPELARQLGLPTEEDDAE
ALARPPRTKMEALGVKATADALESLIREGRPEFRKDDGSTKVWTPHRPPRPEKSEGGVRF
EIKSPYQPRGDQPTAIAELVEGIQRNDRSQVLLGVTGSGKTYTMAKVIEATQRPAIILAP
NKTLAAQLYGEFKSFFPDNAVEYFVSYYDYYQPEAYVPRTDTYIEKDSSINEQIDRMRHS
ATRALLERDDVIIVASVSCIYGIGSVETYTAMTFALKKGERIDQRQLIADLVALQYKRTQ
ADFTRGTFRVRGDVIDIFPAHYEDRAWRVNLFGDTIETIEEFDPLTGHKQDELEFIKMYA
NSHYVTPRPTLVQAIKSIKSELKQRLDQLHDQGRLLEAQRLEQRTTFDLEMMEATGSCAG
IENYSRYLTGRLPGEPPPTLFEYVPDNALVFADESHVTVPQIGGMFRGDFRRKATLAEYG
FRLPSCMDNRPLRFEEWDMMRPQTVAVSATPGGWELNESGGVFVEQVIRPTGLIDPPVNI
RPARTQVDDLVGEVRATAQAGYRSLITVLTKRMAEDLTEYLHEQGIRVRYMHSDIDTIER
IEIIRDLRLGAFDALVGINLLREGLDIPECALVAILDADKEGFLRSETSLIQTIGRAARN
VDGQVILYADQMTGSMERAIAETNRRREKQVEYNTANGITPESVKKQIGDILNSVYERDH
VLVEVGGHDMTDDVISIGHNFEAVLADLETRMREAAADLNFEEAARLRDEVKRLRATELA
VVDDPTAKQRTVQVKAGAYAGTKKYGDAANLPVSAMKKKTVSSALKASGGGSGSKVHKPH
LDEMHGPESLPYRENPSLPSKPFGSTSRIIQPTDSRQSGPEFGPAPKSTGGQPGRRGGWK
KR
NT seq 2889 nt   +upstreamnt  +downstreamnt
gtgcagccgatcgggccggcgctggccgagttgctcaatcccgcgatcaatcgcggcgat
gccggactgggatcaggcaccgggctgcagccgccgccggacaattcgcgcgaccgccgc
gccgggggcgaggctgccgcccatcgcgcacgcgcctcgacgccgaaggagtttccgcag
gatacgacgcgaccgatgccgcttcgtcccaatccgcagccgcccggggcgcgcgcttcg
gagagcggcggtttcgacgaggcgccgcaggccaattacggcaccgccgccacgatcccg
acgctcgacccggaactggcgcggcagctcggacttcccaccgaagaggacgatgccgag
gcgctggcgcggccaccgcgcaccaagatggaggcgctcggcgtcaaggccaccgcggac
gcgctggaatcgctgatccgcgagggccggccggaattccgcaaggacgacggctccacc
aaggtgtggaccccgcaccggccgccgcgcccggagaagtccgaaggcggcgtgcgcttc
gagatcaaatcgccctaccagccgcgcggcgaccagccgaccgcgatcgccgaactcgtc
gaaggcatccagcgtaacgaccgcagccaagtgctgctcggcgtcaccggaagcggcaag
acctacaccatggccaaggtgatcgaggcgacgcagcggcccgccatcatcctggcgccg
aacaagacgctcgccgcccagctctatggcgagttcaagagctttttccccgacaacgcg
gtcgagtatttcgtcagctattacgactactaccagccggaagcctacgttccacgcacc
gacacctacatcgaaaaggattcttcgatcaacgagcagatcgaccgcatgcgccactcg
gcgacgcgcgcgctgctcgaacgcgacgacgtcatcatcgtggcgtcggtgtcctgcatc
tacggtatcggctcggtcgagacctacaccgcgatgaccttcgcgctgaaaaagggcgag
cgcatcgaccagcgccagctcatcgccgacctcgtcgccctccagtacaagcgcacccag
gccgattttacccgcggcacgtttcgcgtgcgcggcgacgtcatcgacatcttcccggcg
cactatgaggaccgggcctggcgcgtgaacctgttcggcgacaccatcgagaccatcgag
gagttcgatccgctcaccggccacaagcaggatgagctcgaattcatcaagatgtatgcc
aactcgcactacgtgacgccgcgcccgacgctggtgcaggcgatcaagtcgatcaaatcg
gagctgaagcagcggctcgaccaactgcacgaccagggccgtcttctggaagcgcagcgg
ctggagcagcgcaccaccttcgatctcgagatgatggaggcgacgggaagctgcgccggc
atcgagaactattcgcgctatctcaccgggcgcctgcccggcgagccgccgccgacgctg
ttcgaatacgtccccgacaacgcgctggtgttcgccgacgagagccacgtcaccgtgccg
cagatcggcggcatgttccgcggcgacttccgccgcaaggcgacgctggccgaatacggc
ttccgtttgccctcctgcatggacaaccgcccgctccgcttcgaggagtgggacatgatg
cggccgcagacggttgcggtgtcggcaacgccgggcggctgggagctgaacgagagcggt
ggcgtgttcgtcgaacaggtgatcagaccgacggggctcattgatcctcccgtcaacatc
cgccccgcccgcacccaggtcgacgatctcgtcggcgaggtccgtgccaccgcccaggcc
ggctaccgctcgctgatcaccgtgctcaccaagcgcatggcggaggacctcaccgaatat
ctgcatgagcaggggattcgcgtccgctacatgcactccgatatcgacaccatcgagcgc
atcgagatcatccgggatctccgcctcggcgcgttcgacgcgctggtcggcatcaacctc
ttgcgcgaaggcctcgacattcccgaatgcgcgctggtcgcgattctggacgccgacaag
gaaggttttttgcgcagtgaaacgtccttgattcagaccatcggccgtgccgcgcgcaac
gtcgacggccaggtgatcctctacgccgaccagatgacgggctcgatggagcgcgccatc
gcggaaaccaaccggcgccgcgaaaagcaggtcgagtacaacaccgccaacggcatcacg
ccggagagtgtgaagaagcagatcggcgacatcctcaactccgtctacgagcgcgaccac
gtgctggtcgaggtcggcggccacgacatgaccgacgacgtcatttcgatcggtcacaat
ttcgaagccgtgctcgccgatctcgaaacccgtatgcgcgaggccgccgccgatctgaac
ttcgaggaagccgcccgcctccgcgacgaagtcaagcgcctgcgcgccacggagctcgcg
gtggtcgacgaccccaccgccaagcaacgcaccgtgcaagtcaaggccggcgcctacgcc
ggcaccaagaagtacggcgacgccgcgaatttgcccgtcagcgccatgaagaagaaaacc
gtgagctccgcgctgaaagccagcggcggcggcagcggctcgaaggtgcacaagccgcat
ctcgacgagatgcacgggccggagtcgttgccctaccgcgaaaacccgagcctgccgtca
aaaccgttcggcagcacgagccggatcatccagccgacggactcacggcagtcgggaccg
gagttcgggcccgcgccgaagtcgacgggcgggcagccggggcgacggggtgggtggaag
aagaggtag

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