Bradyrhizobium japonicum USDA 6: BJ6T_27640
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Entry
BJ6T_27640 CDS
T01848
Name
(GenBank) glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
bju
Bradyrhizobium japonicum USDA 6
Pathway
bju03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bju00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BJ6T_27640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bju03400
]
BJ6T_27640
Enzymes [BR:
bju01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
BJ6T_27640
DNA repair and recombination proteins [BR:
bju03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BJ6T_27640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAL08042
LinkDB
All DBs
Position
complement(2846386..2846898)
Genome browser
AA seq
170 aa
AA seq
DB search
MPASSPHRLPDQLRPKLLLVFVGTAASTRSAELGHYYAHPGNRFWRAIHEAGITPRRYQP
GEFAGLIELGIGFTDLSKSGAGMDHQIAAETIDVPGFRAKIEKYRPMTIAFTSKKAASLF
YGRPSSVIALGRQPRDAGLPEIFVLPSPSGAASGHWTLEPWRELAAWIAA
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgcctcttcccctcaccgcctccccgaccagctccgtcccaagctcctgctcgtc
ttcgtcggcaccgccgccagcacgcgctcggccgaactcgggcactactacgcccatccc
ggcaaccgcttctggcgcgcgatccatgaggccggcatcacgccgcggcgttatcagccg
ggcgagttcgcaggcttgatcgagctcgggatcggcttcaccgatctctccaagtcaggc
gccgggatggatcaccagatcgcggctgaaacgatcgacgtgccggggttcagggccaag
atcgaaaaatatcggccgatgacgattgcgttcacgagcaagaaggcggcgagcttgttt
tatggcaggccgtcgagcgtgattgcgcttgggcggcagccgcgcgatgcaggtttgccg
gagattttcgtgctgccctcgccctccggcgctgcgtccggtcactggacgctggagccg
tggcgcgagctggcggcatggatcgctgcgtag
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