Bradyrhizobium japonicum USDA 6: BJ6T_28230
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Entry
BJ6T_28230 CDS
T01848
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
bju
Bradyrhizobium japonicum USDA 6
Pathway
bju00470
D-Amino acid metabolism
bju00550
Peptidoglycan biosynthesis
bju01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bju00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BJ6T_28230 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BJ6T_28230 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bju01011
]
BJ6T_28230 (murD)
Enzymes [BR:
bju01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
BJ6T_28230 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
bju01011
]
Precursor biosynthesis
Amino acid ligase
BJ6T_28230 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
KARI_N
AdoHcyase_NAD
ADH_zinc_N
UDPG_MGDP_dh_N
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
BAL08101
LinkDB
All DBs
Position
2907647..2909047
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AA seq
466 aa
AA seq
DB search
MIPVTSFAGKTVAVFGLGGSGLASCHALKAGGAEVIAADDNVENVAKAAQAGFITADLRN
VSWANFAALVLAPGVPLTHPVPHWSVLKAREAGCEVIGDIELFCRERRRHAPNAPFVAIT
GTNGKSTTTALIAHLTKVAGYDTQMGGNIGTAILSLEPPRTGRVHVIEMSSYQIDLTPSL
DPSVGILLNVSEDHIDRHGTLAHYAAVKERLVASVQAGGTSIVGVDDGFCRDIADRLDRA
GKNVVRISVKNPLASGIHVEHGTIVRTAGGARSEIAKLGGIGSLRGQHNAQNAACAAAAA
LAMGISLDVLQNGLRSFPGLAHRMEQVGRRGNVLFVNDSKGTNADATAHALSSFSEIFWI
AGGKPKAGGITGLTGYFPRIRKAYLIGEAAQEFSGTLGTQVAHEISQTLDVAVEHAARDA
EASGLTDAVVLLSPACASFDQYRNFEIRGTKFRELVQALPGVKPVV
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggtcacatccttcgccggcaagaccgtcgcggtgttcggcctcggcggctcg
gggcttgcgtcctgtcacgcgttgaaagcgggcggcgccgaggtgatcgccgccgacgac
aatgtcgagaacgtcgccaaggcggcacaggccggtttcatcacagccgatttgcgcaat
gtctcctgggcgaatttcgcggcgctggtgctcgcgccgggcgtgccgctcacccatccc
gtgccgcactggagcgtgctgaaggcgcgcgaggccggctgcgaggtgatcggcgatatc
gagctgttctgccgcgagcggcggcggcacgcgcccaacgcgccgttcgtcgcgatcacc
ggcaccaacggcaagtcgaccacgacggcgctgatcgcgcatctcacaaaggtcgccggc
tacgacacccagatgggcggcaatatcggtacggcgatcctgtcgctggagccgccgcgc
acgggccgcgtccacgtcatcgagatgtcgtcctaccagatcgacctcacgccctcgcta
gatccctccgtcggcatcctgctcaatgtcagtgaggaccacatcgaccgtcacggcacc
ctcgcgcattacgctgcggtgaaggagcgtctcgtcgccagcgtgcaggcgggcggcacc
tcgatcgtcggcgtcgacgatggcttctgccgcgacatcgccgaccggctcgaccgcgcc
ggcaagaacgtggtgcggatctccgtcaagaacccgctggcctccggcatccatgtcgag
cacggcacgattgtgcgcaccgcgggcggcgcgaggagcgagatcgcaaagctcggcggc
atcggctcgctccgcggccagcacaacgcgcagaacgcggcctgcgccgccgccgccgcg
ctcgcgatgggcatcagcctcgatgtgctgcagaacggcctgcgcagctttccgggcctc
gcgcatcgcatggagcaggtcggccgccgcggcaacgtgctgttcgtcaacgactccaag
ggcaccaacgccgatgccaccgcgcatgcgctgtcgtccttttcggaaatcttctggatc
gccggcggcaagcccaaggcgggcggcatcactggcctcaccggctacttcccgcgcatc
cgcaaggcctatctgatcggcgaggccgcgcaggagttttcgggaacgctgggcacgcag
gtcgcgcacgagatcagccagacgctggacgtcgccgtcgagcacgccgcgcgcgatgcc
gaggcatccggtctcacggatgcggtggtgctgctgtcacccgcctgtgcgtccttcgac
cagtaccgcaacttcgagatccgcggcaccaagttccgcgaactggtgcaggcactgccg
ggtgtgaaaccggtggtgtga
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