Bradyrhizobium japonicum USDA 6: BJ6T_46520
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Entry
BJ6T_46520 CDS
T01848
Name
(GenBank) RNase III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bju
Bradyrhizobium japonicum USDA 6
Brite
KEGG Orthology (KO) [BR:
bju00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BJ6T_46520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bju03019
]
BJ6T_46520
03009 Ribosome biogenesis [BR:
bju03009
]
BJ6T_46520
03036 Chromosome and associated proteins [BR:
bju03036
]
BJ6T_46520
Enzymes [BR:
bju01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
BJ6T_46520
Messenger RNA biogenesis [BR:
bju03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BJ6T_46520
Ribosome biogenesis [BR:
bju03009
]
Eukaryotic type
90S particles
RNase
BJ6T_46520
Prokaryotic type
rRNA processing factors
BJ6T_46520
Chromosome and associated proteins [BR:
bju03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
BJ6T_46520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
BAL09918
LinkDB
All DBs
Position
4725717..4726604
Genome browser
AA seq
295 aa
AA seq
DB search
MKDEAKDIPIQSTEPAAGADGDGEAATKTLATKTPETKTSEIKTPETKTPAKKKRVRSSK
AKGSDANAALEARIGHSFADPNLLMQAITHVSALKSGRKRGDSYQRLEFLGDHVLGLVVS
DMLYHAFPNADEGELSKRLAELVRKESCADVAKSLGLLDDVKLGSVGPSADARLRKSVLG
DICEAVIGAVFLDGGYAAAAEFVRRNWTERMHKPRRPLRDPKTVLQEWAQGKGLPTPVYR
EVERTGPHHDPQFRVAVDLPGLAPAEGIGGSKRAAEKVAASVMIEREGVGGGNDG
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgaagccaaggacatcccgatccaatcgaccgagcccgcggcgggcgccgac
ggcgacggcgaagcggcgaccaagacgcttgcgaccaagacgcctgaaaccaagacttcc
gaaatcaagactcctgaaaccaagacgcctgcaaagaagaagcgggtgcgcagcagcaag
gccaagggctcggatgcgaacgcggcgctcgaggcgcgcatcggccacagctttgccgat
ccaaatctgctgatgcaggcgatcacgcatgtctcggcgctgaagtccgggcgcaagcgc
ggcgacagctatcagcggctggaattcctgggcgaccatgtgctggggctcgtcgtctcc
gacatgctctatcacgccttcccgaatgccgacgagggcgagctatccaagcgactggcc
gaactggtgcgcaaggagagctgcgccgacgttgccaagtcgctcggtctgctcgacgac
gtcaagcttggttcggtcgggccgagcgccgatgcccgcctgcgcaagagcgtgctcggc
gacatctgcgaggccgtgatcggcgccgtcttcctcgacggtggctacgcggcggcggcg
gaattcgtcaggcgcaactggaccgaacgcatgcacaagccgcggcgtcccttgcgcgat
cccaagaccgtgctgcaggaatgggcgcaggggaaggggctgccgacgccggtttatcgc
gaggtcgagcgcaccggcccgcatcacgatccgcagttccgcgtcgcggtggatctgccg
ggattggcgccggccgaaggcatcggtggcagcaagcgtgcagcggagaaggtggcggct
tcagtgatgatcgaacgtgaaggtgttggcggcggcaatgacggctga
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