Bradyrhizobium japonicum USDA 6: BJ6T_57030
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Entry
BJ6T_57030 CDS
T01848
Name
(GenBank) ABC transporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
bju
Bradyrhizobium japonicum USDA 6
Pathway
bju02010
ABC transporters
bju03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
bju00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BJ6T_57030
03070 Bacterial secretion system
BJ6T_57030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bju02000
]
BJ6T_57030
02044 Secretion system [BR:
bju02044
]
BJ6T_57030
Transporters [BR:
bju02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
BJ6T_57030
Secretion system [BR:
bju02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
BJ6T_57030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_16
DUF87
ABC_ATPase
AAA_29
MeaB
P-loop_TraG
Zeta_toxin
AAA_22
AAA_18
PRK
AAA_24
Motif
Other DBs
NCBI-ProteinID:
BAL10958
LinkDB
All DBs
Position
complement(5773623..5775755)
Genome browser
AA seq
710 aa
AA seq
DB search
MTTNAVSTDTGLDALLTLLHLQGVAADRDQLRHRAGTAIFGAADIIRCAKSLGLKARTYR
TKWERLSGSPLPAIAMLRDGSFMVIARASADKVLVQSPQAQRPMLMERDEFTVLWDGGLI
LMARRAGLSDLGRHFDITWFIAAIGKYRRLFGEVLAASFFLQLFALVSPLFFQVVIDKVL
VHRSLSTLDVLVIGLVVVSLFDTVLGILRNYLFAHTTNRIDVELGARLFHHLLALPMAWF
QARRVGDSVARVRELENIRNFITSSSLTLLIDLFFTSVFLAVMFAYSPLMSCIVLASFPF
YIAISAVATPLFRRRLDEKFRRGAENQAFLVESVSGIETLKAMAVEPQMQRRWEEQLAGY
VSASFGVTSLGNTASQLVQFVSKVVTAAILYVGARLVIGDALTVGELVAFNIFAGRVSAP
VLRLAQVWQDFHQARLSIARLGDILNSAAEPAYSAARAGLPPIRGNIRFEHVSFRYRLDG
PEILHDVSFDVPAGQTVGIVGSSGSGKSTFAKLVQRLYVPQGGRVLIDGMDLVMTDPAWL
RRQIGVVLQDNMLFNRSVRDNIALADPTLPMDRIMEAAKLAGAHDFILELPEGYDTVVGE
RGSTLSGGQRQRIAIARALVTNPRILIFDEATSALDYESERIIHENMKEIARGRTVLIIA
HRLSTVRGADRIFTLERGRLVEDGTHDALIKTGGRYAALYRLQGGIYEVG
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgaacgcggtctcgaccgatacggggttggacgcgctgctcaccctgctgcat
ttgcaaggtgttgcggccgaccgcgaccagctcaggcaccgggccggaacggccatcttt
ggcgcagcggacatcatccgctgcgccaaatccctcggtctgaaggcacgaacctatcgg
accaaatgggaacgcttgtcgggcagcccgctgccggcgatcgcgatgctgcgcgacggc
agcttcatggtcatcgcaagagcctccgccgacaaggtgctggtgcagtcgccacaggcg
cagcgcccgatgctgatggagcgcgacgagtttactgtgctctgggacggcggactgatc
ctgatggcccggcgcgccgggctatccgacctcgggcgtcacttcgatatcacctggttc
atcgccgcgatcggcaaataccggcggctgtttggcgaggtgctcgccgcctcgttcttt
ctccagctctttgcgctggtctcgccgctgttcttccaggtcgtgatcgacaaggtgctg
gtgcatcgctcgttgtccacgctcgacgtgctcgtcatcggtctcgtcgtcgtctcgctg
ttcgacacggtgctgggtatcctgcgtaattatctgtttgcgcatacgaccaaccgcatc
gacgtggagctgggagcgcggctgttccaccaccttctggcattgccgatggcatggttt
caggcgcggcgcgtcggcgattccgtagcgcgggttcgcgagctcgagaacatccgcaat
ttcatcaccagctcgtcgctgacgctgctcatcgacctgttcttcacctcggtattcctg
gcggtgatgttcgcctattcgccgctgatgagctgcatcgtgctggcatcgttcccgttc
tacatcgcgatctcggcggtggcgacgccgctattccgccgcaggctggacgagaaattc
cgccgcggcgccgagaaccaggcgttcctcgtcgagagcgtcagcggcatcgagacgctg
aaggcgatggcagtcgagccgcagatgcagcgccgctgggaagaacagctcgccggctac
gtctcggcgagttttggtgtcaccagcctcggcaacaccgcaagccagctcgtccagttc
gtcagcaaggtcgtgaccgccgccattctctatgtcggcgcgcgcctcgtgatcggcgac
gcattgaccgtcggcgagctcgtagcattcaacatttttgcggggcgcgtttcggcgccc
gtgctgcggctggcccaggtctggcaggattttcatcaggcgcggctctcgatcgcgcgg
cttggcgacatcctcaacagcgcggcagagccggcttattcggccgcgcgcgccgggctg
ccgccgatccggggcaatatccggttcgagcacgtgtcgttccgctaccggctcgatggg
ccggaaatcctgcatgacgtctcgttcgatgttccggccgggcaaaccgtcggcatcgtc
ggctcctcgggctcgggcaagagcacgttcgccaagctggtgcagcggctctacgttccg
caaggcggccgcgtgctgatcgacgggatggatctggtgatgaccgatccggcctggctc
cgccgccagatcggcgtggtgctccaggacaacatgctgttcaaccgctcggtgcgcgac
aacatcgcgctggccgatccgaccctgccgatggaccgcatcatggaggcagcaaaactt
gcgggcgcgcatgatttcattctggagcttcccgaaggctacgacacggtggtcggcgag
cgcggctcgacgctctcgggcgggcagcgccagcgcatcgcgatcgcccgcgcattggtg
accaatccccgcatcctgatcttcgatgaagcgaccagcgcgctcgactatgaaagcgag
cggatcatccatgagaacatgaaggagatcgccaggggccgcaccgtcctgatcatcgcg
catcgtctgtccaccgttcgcggcgccgatcgcatcttcacgctcgagcgcggccgtctg
gtcgaagacggcacgcatgacgcgttgatcaagaccggtggccgatacgcggccctgtat
cgtctccagggagggatctatgaggtcggctag
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