Bradyrhizobium japonicum USDA 6: BJ6T_72230
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Entry
BJ6T_72230 CDS
T01848
Name
(GenBank) ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
bju
Bradyrhizobium japonicum USDA 6
Pathway
bju00630
Glyoxylate and dicarboxylate metabolism
bju00710
Carbon fixation by Calvin cycle
bju01100
Metabolic pathways
bju01110
Biosynthesis of secondary metabolites
bju01120
Microbial metabolism in diverse environments
bju01200
Carbon metabolism
Module
bju_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
bju00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BJ6T_72230
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
BJ6T_72230
Enzymes [BR:
bju01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
BJ6T_72230
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Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
BAL12471
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Position
complement(7440784..7442244)
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AA seq
486 aa
AA seq
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MNAHAGTVRGKERYRSGVMEYKRMGYWEPDYTPKDTDVIALFRVTPQEGVDPIEASAAVA
GESSTATWTVVWTDRLTAAEKYRAKCYRVDPVPGTPGSYFAYIAYDLDLFEPGSIANLSA
SIIGNVFGFKPLKALRLEDMRFPVAYVKTFQGPATGIVVERERLDKFGRPLLGATVKPKL
GLSGRNYGRVVYEALKGGLDFTKDDENINSQPFMHWRDRFLYCMEAVNRAQAASGEVKGT
YLNVTAGTMEDMYERAEFAKELGSCIVMIDLVIGYTAIQSMAKWARRNDMILHLHRAGHS
TYTRQKSHGVSFRVIAKWMRLAGVDHIHAGTVVGKLEGDPNTTRGYYDVCREDFNPTKLE
HGLFFDQSWASLNKMMPVASGGIHAGQMHQLLDLLGEDVVLQFGGGTIGHPMGIAAGAIA
NRVALEAMILARNEGRDYVHEGPEILARAAETCTPLKAALEVWKDVTFNYESTDTPDFVP
TALETV
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcacacgcaggaaccgtccggggcaaagagcgctatcgatcaggcgtgatggaa
tacaagcgcatgggctattgggagcccgattacacgccgaaggacaccgacgtcatcgcg
ctgttccgcgtgacgccgcaggagggcgtggaccccatcgaggcgtcagcggcggttgcc
ggagaatcctcgaccgcgacctggacggtggtgtggactgatcgcctgaccgctgcggag
aagtatcgcgcaaagtgctaccgcgtcgatccggtgcccggcacgccgggctcgtatttc
gcctacatcgcctacgacctcgacctgttcgagccgggttcgatcgccaacctgtcggcc
tcgatcatcggcaacgtgttcggcttcaagccgctgaaggcgctgcgtctggaagacatg
cgcttcccggtcgcctatgtgaagacgttccaggggccggcgaccggcatcgtggtcgag
cgtgagcggctcgacaagttcgggcggccgctgctgggcgcgacggtgaagccgaagctc
ggcttgtccgggcgcaactatggccgcgtggtttacgaggcgctcaagggcgggctcgac
ttcaccaaggacgacgagaacatcaactcgcagcccttcatgcattggcgtgaccgcttc
ctctattgcatggaggccgtgaaccgcgcgcaggcggcgtccggcgaggtcaagggcacc
tacctgaacgtcaccgcggggacgatggaggacatgtatgagcgcgcggagttcgcgaaa
gagctcgggtcgtgcatcgtgatgatcgatctcgtgatcggctacaccgcgatccagtcc
atggcgaaatgggcgcggcgcaacgacatgatcctgcatctgcatcgcgccggtcactcg
acctatacgcggcagaagagccacggcgtgtcgttccgcgtcatcgcgaagtggatgcgg
ctcgccggcgtcgaccacatccatgccggcacggtggtcggcaagctcgaaggcgatccc
aacaccacgcgcggctattacgacgtctgccgcgaagacttcaacccgaccaagctcgag
catggcctgttcttcgaccagtcctgggcgagcctcaacaagatgatgccggtcgcctcc
ggcggcatccatgccggccagatgcaccagctgctcgacctcctcggcgaggacgtcgtg
ctgcaattcggcggcggcaccatcggccatcccatgggcattgcggccggtgcgatcgcc
aaccgcgtggcgctcgaagcgatgatcctcgcccgcaacgaggggcgcgactacgtccat
gaaggtccggagatcctggccagggcggccgagacctgcacgccgctgaaggctgcgctc
gaggtctggaaggacgtcaccttcaactatgaatccaccgacacgccggacttcgtgccg
accgcgctggaaaccgtttga
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