Bradyrhizobium japonicum USDA 6: BJ6T_78170
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Entry
BJ6T_78170 CDS
T01848
Symbol
nifA
Name
(GenBank) Nif-specific regulatory protein
KO
K02584
Nif-specific regulatory protein
Organism
bju
Bradyrhizobium japonicum USDA 6
Pathway
bju02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bju00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BJ6T_78170 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bju03000
]
BJ6T_78170 (nifA)
Transcription factors [BR:
bju03000
]
Prokaryotic type
Helix-turn-helix
Other families
BJ6T_78170 (nifA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_5
AAA
GAF_2
Mg_chelatase
AAA_3
AAA_2
MCM
bpMoxR
AAA_16
TIP49
HTH_28
Motif
Other DBs
NCBI-ProteinID:
BAL13062
LinkDB
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Position
complement(8079973..8081721)
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AA seq
582 aa
AA seq
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MLHIPSSSERPASQPEPERAPPGEPSHESALAGIYEISKILNAPGRLEVTLANVLGLLQS
FVQMRHGLVSLFNDDGVPELTVGAGWSEGTDERYRTCVPQKAIHEIVATGRSLMVENVAA
ETAFSAADREVLGASDSIPVAFIGVPIRVDSTVVGTLTIDRIPEGSSSLLEYDARLLAMV
ANVIGQTIKLHRLFAGDREQSLVDKDRLEKQTVDRGPPARERKQLQAHGIIGDSPALSAL
LEKIVVVARSNSTVLLRGESGTGKELVAKAIHESSVRAKRPFVKLNCAALPETVLESELF
GHEKGAFTGAVSARKGRFELADKGTLFLDEIGEISPPFQAKLLRVLQEQEFERVGSNHTI
KVDVRVIAATNRNLEEAVARSEFRADLYYRISVVPLLLPPLRERRSDIPLLAREFLRKFN
SENGRSLTLEASAIDVLMSCKFPGNVRELENCIERTATLSAGTSIVRSDFACSQGQCLST
TLWKSTSYGKTDPAAPMQPVPAKSIIPLAETAPPPQAVCEPGSLAPSGTVLVSGARMADR
ERVVAAMEKSGWVQAKAARLLGLTPRQVGYALRKYGIEIKRF
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgctgcatatcccctcctcgagcgaaagacctgcctcgcagccggaaccggagcgtgcc
cccccgggggagccgtcgcatgagagcgcgctggccggcatctacgaaatatcgaaaata
ctaaatgctcccggccggctcgaagtcaccttggccaacgttctcggtcttctgcaatcg
tttgtgcagatgcgacacggcctcgtctcgctgttcaacgatgacggcgttccagaactt
acagttggcgccggctggagcgaaggcactgacgaacgttaccggacgtgcgtgccgcag
aaagcaatccacgagatcgtagcgacaggcaggtctcttatggtcgagaatgtagccgcc
gagacggccttcagcgctgccgaccgggaggttctcggcgcctctgatagtataccggta
gcgttcatcggggtcccgattcgcgttgattcgacggtcgttggtacgctgacgatcgac
cgtatcccggaaggcagttcaagtcttctcgagtacgatgcgcggctgctcgccatggtc
gcgaacgtgataggacaaacgatcaagttacatcgcttgttcgccggcgatcgcgaacaa
tcgttggtggacaaggaccggctagagaaacagacagttgatcgtgggccgcccgctcgc
gagcgcaagcagcttcaggcacacgggatcattggcgacagcccggcgctgagcgcactg
cttgagaagattgtcgttgtagccagatcaaacagcacggttctgctgcgtggcgaatcc
ggtaccgggaaggagctggtagccaaggccattcacgagtcgtccgttcgtgctaagcgg
ccgttcgttaagctgaattgcgcggcgctccccgagacggtcctggaatcggaattgttt
ggccatgagaaaggtgcctttaccggtgctgtcagcgcccgcaaggggcgcttcgagctt
gctgacaaagggacgctatttcttgacgagatcggagagatctcacctccgttccaggcg
aagttgctgcgagttctgcaagagcaggagttcgagcgcgtcggcagcaatcacacgatt
aaagtcgatgttcgggtgatagctgcgaccaacaggaaccttgaagaggctgtggcaagg
agcgaattccgcgcggacctctactatcgtattagcgtagttcccttgttgttgccgccg
cttcgcgaaagacgcagtgatattccgctgctcgcaagagagttcctcagaaagtttaac
agcgagaacggccgctctcttactctggaggcgagtgcgatcgatgtactgatgagctgt
aaatttccgggaaatgtccgcgaactcgagaactgcatcgagcggaccgcgacactcagt
gccggaacatcgattgtaagaagtgactttgcatgcagccaaggccaatgcctttccacg
acgctttggaaaagcacatcgtatggcaagacagacccggcggcaccgatgcaaccggtg
cctgcaaagtccatcatcccgctggctgaaacggcccctccgccgcaggctgtctgcgaa
ccgggctcattggcaccttccggcacagttctcgttagtggtgcgagaatggctgatcgc
gagcgggtcgttgcggctatggaaaagtctggctgggtgcaggccaaggcagcgcgccta
ctcgggctaaccccgcgccaagtcggctacgcgctgaggaaatacggaatcgagataaag
cggttctga
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