Bos javanicus (banteng): 133227038
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Entry
133227038 CDS
T11659
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
bjv Bos javanicus (banteng)
Pathway
bjv04136
Autophagy - other
bjv04140
Autophagy - animal
bjv04211
Longevity regulating pathway
bjv05010
Alzheimer disease
bjv05014
Amyotrophic lateral sclerosis
bjv05016
Huntington disease
bjv05017
Spinocerebellar ataxia
bjv05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
bjv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133227038 (ATG13)
04136 Autophagy - other
133227038 (ATG13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
133227038 (ATG13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
133227038 (ATG13)
05014 Amyotrophic lateral sclerosis
133227038 (ATG13)
05016 Huntington disease
133227038 (ATG13)
05017 Spinocerebellar ataxia
133227038 (ATG13)
05022 Pathways of neurodegeneration - multiple diseases
133227038 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bjv04131
]
133227038 (ATG13)
03029 Mitochondrial biogenesis [BR:
bjv03029
]
133227038 (ATG13)
Membrane trafficking [BR:
bjv04131
]
Autophagy
Autophagosome formation proteins
ULK complex
133227038 (ATG13)
Atg1 complex
133227038 (ATG13)
Mitochondrial biogenesis [BR:
bjv03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
133227038 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
133227038
NCBI-ProteinID:
XP_061237329
LinkDB
All DBs
Position
15:76849088..76891161
Genome browser
AA seq
565 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYAVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGDVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRHFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
ACPSVEDSQEVCATSFSTSPPSQCVFTVTKALFQTPTPVVTDTLRVPTAGLAFSHQLSSS
RLSYQPAALGVGSADLAYPVVFAAGLNAAHPQQLMVPGKEGGVPLGPSQPAHAAQADQER
LATYTPSDGAHCAATPSSSEDAETVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTL
TSLDIPFAMFAPKNLELEDADPMPVPRTSPCLRLVLKQVNPPDSPETTSPLQGSLHSDGS
SGGSSGHTQDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSLDIGAQSMAEDL
DSLPEKLAAHEKNVREFDAFVETLQ
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatcttaattcccaggacagaaaggacctggacaagttcattaagtttttt
gccctcaagactgtccaagtgattgtccaggctcgactgggagagaagatttgtactcgt
tcgtcttcttccccaacgggttcagactggttcaatttagcaatcaaagacatcccagag
gttacacatgaagcaaagaaggccctggcagggcagctgcctgctgttgggaggtctatg
tgtgtggagatctcactcaagacttctgagggagattccatggagctagaaatctggtgt
ctggaaatgaatgaaaagtgtgataaagaaatcaaagtttcctatgctgtgtacaacaga
ttgtcgttgctgctgaagtctctgcttgctataactagggtgacaccagcttacagactc
tccagaaagcaggggcatgaatatgtcatcttatacagaatatattttggggacgttcag
ctgaatggcttaggggaaggtttccagacagttcgtgttgggacagtgggtacccctgtg
ggcaccatcactctttcctgtgcttacaggattaacttggcattcatgtccaccaggcac
tttgagaggaccccacctatcatgggcattattattgatcactttgtggaccgtccctat
cccagctcctcgcccatgcacccctgcaattacagaaccgccggcgaggacactggagta
gcgtgtccttctgtggaagactctcaggaagtgtgcgccacctccttttccacctcgcct
ccctcccagtgtgtgtttacggtcacaaaggcactttttcagacccctactcctgtggtg
acggacaccctgagggtccccacggcaggactggccttttcccatcaactctccagctct
cgcctttcctatcagcctgctgccctgggcgttggatctgctgacctggcttatccagta
gtgtttgctgctggcttaaacgccgcacaccctcagcagctaatggtccccgggaaggaa
ggtggggtaccccttggtcccagccagcctgcccatgctgcccaggctgaccaggagaga
ctggcaacctacaccccttctgatggggcccactgcgccgccacgccgtccagcagtgag
gacgctgaaactgtatcaaacagcagcgagggacgggcctccccccacgatgtcttggag
accatctttgtccggaaagtgggggcttttgtcaacaagcccatcaaccaggtgaccctg
accagtttggacataccctttgccatgtttgctcccaagaacctggagctggaggatgca
gatcccatgccagtgcccaggaccagcccctgcctccgccttgttctgaaacaggtgaat
cccccagattccccagagactacatctcctctccagggcagcctgcactctgatggctcc
agcgggggcagcagcggccatacccaggacgacttcgtcatgatcgactttaaaccagct
ttttctaaagacgacatccttccgatggacttggggaccttctatcgtgaatttcagaac
ccgcctcagctgagcagcctctccctcgacatcggggcccagtccatggccgaggacttg
gactcactcccagagaagctggctgcgcacgagaagaatgtccgagaatttgatgccttt
gtagaaaccctgcagtaa
DBGET
integrated database retrieval system
