Bos javanicus (banteng): 133227152
Help
Entry
133227152 CDS
T11659
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
bjv Bos javanicus (banteng)
Pathway
bjv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bjv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133227152 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bjv03019
]
133227152 (PATL1)
Messenger RNA biogenesis [BR:
bjv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133227152 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
133227152 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
133227152
NCBI-ProteinID:
XP_061237599
LinkDB
All DBs
Position
15:complement(83326766..83362705)
Genome browser
AA seq
805 aa
AA seq
DB search
MPSVQKVIMKLLCRLSLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAH
ERLAELEEKLPAAVNEQSGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQT
RPVLQPQPGSLNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDLSE
RALPRRSTSPVIGSPPVRAVPIGTPPKQMAVPSFNQQPVQSCSIDFPPPETSSWKGRPMW
KILCPKPVHVRPPMPPRYPAPYGERMSPNQLCSVPNSSLLGHPFPPSVPPVLSPLQRAQL
LGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKLLQGRIGQMLPPAPGFRAFFSAPPPTT
PPPPQQHPPGPGPHLQNLRSQAPMFRPDTTHLHPQHRRLLHQRQQQNRNQHRNLNGAGDR
GSHRSSHQDHIRKDPYANLMLQREKDWVSKIQMMQLQSTDPYLDDFYYQNYFEKLEKLSA
AEEMQGDGPKKERTKLITPQVAKLEHTYKPVQFEGSLGKLTVSSVNNPRKMIDAVVTSRS
EDDETKEKQVRDKRRKTLFIIEKTYSLLLDVEDYERRYLLSLEEERPALMDERKHKICCM
YDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVARILPFLSTEQAADILMTTARNLPFLIK
KDAQDEVLPCLLSPFSLLLYHLPPVTVTSLLQQLMNLPQSAAAPAPSNPHLSAVLQNKFG
LSLLLVVLSRGEDLQSSDAASELAQSNPWTEVMFVATRELLRIPQTGLAKPISIPTNLVS
LFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgccatctgtacagaaagtcataatgaagctattgtgtagattgtctttggaggattgt
cctctggatgaagatgaagatgcatttcagggcctgggagaggaggacgaagagattgat
caattcaatgatgatacatttgggtcaggtgcagttgatgatgattggcaggaagcacat
gagcgcctggctgaactggaagagaagctacctgcagcagttaatgaacaaagcggcaat
ggagaaagggatgagatggacttgttgggtgaccatgaggagaatctggcagagaggctc
agcaagatggtgattgaaaatgaacttgaagacccagctatcatgagggcggtacagacc
aggcccgtgttgcaaccccaaccaggaagtctcaattccagcatctgggatggatctgaa
gttctgaggcgaatccgaggaccactgcttgctcaggaaatgcctacagtgtctgtgtta
gaatatgccttgcctcagaggcccccccagggcccagaagatgatcgggacctttccgag
cgcgcattaccaaggcggtccacctcgcctgtcattgggagtcctcctgttagagctgtc
cccataggcaccccacctaagcagatggctgtgcccagcttcaaccagcagcctgtgcag
tcctgttccatagacttccctccacctgaaaccagcagctggaaaggaaggccaatgtgg
aagattctgtgtccaaagcctgtccacgttcggcccccaatgccgccacggtatcctgct
ccctatggtgagaggatgtctccaaaccagctctgcagtgtcccgaactcctccctgctg
ggccacccttttccccctagcgtccctcctgtcctcagccccctccagagagcacagctt
cttggaggagcacagctacagcctggacggatgtctcccagccagtttgcacgggtccct
ggattcgtgggcagcccacttgccgccatgaatcccaagctgttgcaagggcgaattggg
cagatgctccccccggcgccaggcttccgcgccttcttcagcgccccaccccccactaca
ccgccccctccgcagcagcacccccctggcccaggaccccacctgcaaaacctaagatca
caggctccaatgtttagaccagacacaacccaccttcatccacagcaccgtcgacttttg
catcagagacagcaacagaatagaaatcaacatcggaatctcaatggtgcaggagacaga
gggagtcaccggagcagtcatcaggatcatatccgaaaggatccttatgccaacctcatg
ctgcagcgagaaaaagactgggtctctaaaatccagatgatgcaactgcaaagcactgat
ccctacctggatgatttttattatcagaattactttgaaaaactggagaaactgtcagct
gctgaagaaatgcaaggtgacggcccaaaaaaggagcgcaccaagctcatcacgcctcag
gtggccaagctggagcacacctacaaaccagtgcagtttgagggctctttgggaaagctc
actgtctctagtgtgaataatccccgaaaaatgattgatgctgttgtgacgtctcggagt
gaggatgatgagacaaaagaaaaacaggttcgggacaaaagacgaaaaacccttttcata
attgagaaaacctatagtttactgcttgatgtggaggattacgaaaggcgttatctccta
agtctggaagaagagcgacctgccctgatggatgaaagaaagcacaaaatttgttgcatg
tatgacaacttaagggggaaattgcctggacaggagaggccgagtgatgaccactttgta
cagatcatgtgtatccgaaaggggaagagaatggtagcccggattctgcctttcctctcc
acagagcaagcagctgacattctcatgacaacagccaggaacctccctttcctcatcaag
aaggacgcacaggatgaggtgctgccatgcctattgagtcccttctctctcctcctctac
catcttccaccagtgaccgtcaccagccttctgcagcagctgatgaacctacctcagagt
gcagcggccccagctccgtccaacccgcacctctctgccgtgctccagaacaagtttggc
ctgtccctgcttctcgtcgtcctgagccgcggggaagacctacagagctcagacgccgct
tcagaattggcgcaaagcaacccatggacggaggtgatgtttgtggcaacccgagaactt
ttgcggattccccagacgggcctggccaagccaatctctatacccacaaacctagtatcc
ctcttttctcgttacgttgaccgacagaaactgaacttgctggagacaaaactgcagcta
gttcaggggatacggtaa
DBGET
integrated database retrieval system
