Bos javanicus (banteng): 133227797
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Entry
133227797 CDS
T11659
Symbol
EXOSC10
Name
(RefSeq) exosome complex component 10 isoform X1
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
bjv Bos javanicus (banteng)
Pathway
bjv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bjv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133227797 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bjv03019
]
133227797 (EXOSC10)
Messenger RNA biogenesis [BR:
bjv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
133227797 (EXOSC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
133227797
NCBI-ProteinID:
XP_061238723
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All DBs
Position
16:43257331..43279852
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AA seq
926 aa
AA seq
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MAPPSPRESKAQSATTAAKSDGEMVLPGFPDADSFVKFALGAVVAVTKASGGLPQFGDEY
DFYRSFPGFQAFCETQGDRLLQCMSRVMQYHGCRSNIKDRSKVTELEDKFDLLVDTNDVI
LERVGILLDEASGVNKNQQPVLPAGLQVPQTIVSSWNRKAGEYSKKTKSETFRLLHAKNI
IRPQLKFREKIDNSNTPFLPKIFIKPNAQKPLPQALSKERRERPQDRPEDLDVPPALADL
IHQQRTQQVEQDMFAHPYQYELDHFMPPDSVLQKPEPQLYRPVGETPCHFVSTLDELVEL
NEKLLKCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIIDTLELRSDMYILNESLTDPA
IVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCSVESNKQYQ
LADWRIRPLPEEMLSYARDDTHYLLYIYDKMRLELWERGNEQPTQLQVVWQRSRDICLKK
FIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARREDESYGYVLPNHMMLKI
AEELPKEPQGIIACCNPVPPLVRQQINEMHLLIQQAREMPLLKSEVAAGVRKSGPLPNPE
RLENVLFGPHDCSHTPSDGYPLVPTDGPVPMQKQEGLLSAQEDEENLPDIRCLVATAVVT
LFNEPSAEGNEKSPLTVAQKKAQNIMESFENPFRMFLPSVEHRAHISQSAKFDPSSKIYE
ISNRWKLASQVQVQREPKETAKKKAAEHTAARDQAQEEYRAAAEQAVSVRQQAALENAAK
KRERATSDPRTTEQKQEKKRLKISKKPKDPDPPEKDFTPYDYSKLDFKAFAGNSKSKPSS
QFDPSKQPQSGKMVSCLFRNALQPKKLNSRLETKACPFQLESQTEVSGTIGQRDSVGRQL
QDPLVDWKHQTVVLVLYRLVFKPLKK
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcctagtccccgagagtccaaggcccagtcagccacgaccgcggccaagtct
gacggggaaatggtgctgccgggcttcccggacgcagacagcttcgtgaagttcgctctt
ggggcagtggtggcagtcaccaaggcgtctgggggcctaccacagtttggtgatgagtat
gatttttaccgaagttttcctggcttccaggcattttgtgaaacacagggagacaggttg
cttcagtgcatgagtagggtgatgcagtaccacgggtgccgaagcaacattaaggaccgg
agtaaagtgaccgagctggaggacaagtttgatttgctggtcgacaccaatgatgttatt
ctggaaagagtgggcattttactggacgaagcatcaggcgtgaataagaatcaacaacct
gtcctccctgcagggttacaggtcccccaaaccatagtgtccagctggaaccggaaggca
ggagaatatagcaaaaaaacaaaatctgaaactttccggctgcttcatgcaaaaaacatc
atccgacctcagcttaagttccgagagaagatcgacaactctaacacaccatttcttccc
aaaatcttcattaagcccaatgctcagaaacccctccctcaggcactctccaaagaaaga
cgggaacgcccacaagaccgccctgaggacttggatgtcccccctgccctggcagattta
atccatcagcagagaacccagcaggtggagcaggacatgtttgcgcatccttatcaatat
gaactagatcacttcatgccaccagactcagtccttcaaaagccagagcctcagttatac
agacctgtaggagagacaccctgccacttcgtgtccacactggatgaactagtggaactc
aacgaaaagctcctgaagtgtcaagaatttgcggtagacttggagcaccactcttacagg
agcttcctggggctcacctgcctgatgcagatttccacccggacagaagacttcatcatt
gacactctggagcttcgcagcgacatgtatattctcaacgagagcctcacagacccagct
attgttaaggtcttccatggtgctgattcagacatagaatggcttcagaaggacttcggg
ttgtacgtggtgaacatgtttgatacccaccaggcagctcgccttcttaacctgggcagg
cactccctggaccacctgctgaagctctactgcagcgtggagtcgaacaagcagtaccag
ctggccgactggcggatacgacctctgccggaggaaatgctgagctacgcccgagacgac
actcactacctgctgtacatctatgataagatgcggctggagctgtgggagcgcggcaac
gagcagcccacacagctgcaggtggtgtggcagcgcagtcgagacatctgcctcaagaaa
ttcatcaaacccatcttcacagacgaatcttacctggaactctataggaagcagaagaag
catctgaacacacagcagttgacagcctttcagctgctgtttgcctggagggataaaaca
gctcgtcgggaagatgagagttatggatacgtcctgccaaaccacatgatgctaaagata
gctgaggagctgcccaaggaacctcagggcatcatcgcttgctgtaaccccgtgcctcct
cttgtacggcagcagatcaacgaaatgcaccttctgattcagcaggcacgagagatgcct
ctgctcaagtctgaagtcgcagcgggagtgaggaagagtgggccgctgcccaaccctgag
agattggagaatgttctctttggcccccatgactgctcccataccccgtcagatggctac
cctctcgtcccaactgacgggcctgtgccgatgcagaaacaggagggcctcctctccgcc
caagaagacgaggagaacctgccagacatcagatgtcttgtcgctaccgctgtcgtcaca
ttatttaacgaacctagtgctgaaggaaatgaaaaaagtccattaacggttgcacagaaa
aaagcccagaacataatggagtcctttgaaaatccatttcggatgtttctgccttcagta
gaacaccgggctcacatttctcagtcagcaaagtttgatccatcatcgaaaatctatgaa
atcagcaaccgttggaagctggcaagccaggtacaggtacaaagagaacctaaagaaact
gccaagaagaaggcagctgagcacacagctgcccgggaccaggcccaagaggagtatagg
gcagccgcggagcaggccgtgtccgtccgccagcaggctgcactagagaacgctgccaag
aagagagagcgggcgacgagtgacccgaggacgacagaacagaagcaagagaagaaacgc
ctcaaaatttccaagaagccaaaagacccagatccaccagaaaaagacttcactccctat
gactacagcaagttggatttcaaggcttttgctggaaacagcaaatccaaaccttcgtcc
cagtttgacccaagcaagcagccccagtcaggcaagatggtttcttgtcttttcagaaat
gcattgcagccaaaaaaattaaacagtcgattggaaacaaaagcatgtcctttccaactg
gaaagtcagacagaggtttcaggcacaattggccaaagagatagtgttggaagacagctt
caggatcccctggtggactggaagcaccagacagtggtgctggttttgtacagactcgtt
tttaaaccattaaaaaaataa
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