Bos javanicus (banteng): 133230769
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Entry
133230769 CDS
T11659
Symbol
ERCC2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD isoform X1
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
bjv Bos javanicus (banteng)
Pathway
bjv03022
Basal transcription factors
bjv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bjv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133230769 (ERCC2)
09124 Replication and repair
03420 Nucleotide excision repair
133230769 (ERCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bjv03021
]
133230769 (ERCC2)
03036 Chromosome and associated proteins [BR:
bjv03036
]
133230769 (ERCC2)
03400 DNA repair and recombination proteins [BR:
bjv03400
]
133230769 (ERCC2)
Enzymes [BR:
bjv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
133230769 (ERCC2)
Transcription machinery [BR:
bjv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
133230769 (ERCC2)
Chromosome and associated proteins [BR:
bjv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
133230769 (ERCC2)
DNA repair and recombination proteins [BR:
bjv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
133230769 (ERCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
AAA_22
SesA
SNF2-rel_dom
TcaA_5th
Motif
Other DBs
NCBI-GeneID:
133230769
NCBI-ProteinID:
XP_061244620
LinkDB
All DBs
Position
18:complement(53032071..53048356)
Genome browser
AA seq
760 aa
AA seq
DB search
MKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ
RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEKQEGEKLPFLGLALSSRKNLCIHPE
VTPLRFGKDVDGKCHSLTASYVRAQYQRDSSLPHCRFYEEFDVHGRQVPLPTGIYNLDDL
KAVGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID
NVCIDSMSVNLTRRTLDRCQANLETLQKTVLRIKETDEQRLREEYRRLVEGLREASAARE
TDAHLANPVLPDEVLKEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG
LAQRVCIQRKPLRFCAERLRSLLHTLEISDLTDFSPLTLLANFATLVSTYAKGFTIIIEP
FDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT
FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT
SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYF
LRQMAQPFHREDQLGLSLLSLEQLESEETLRRIEQIAQQL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacgtggacgggctgctggtctacttcccctacgactacatctacccggag
cagttctcgtacatgctggagctcaaacgcacgctggatgccaagggtcatggagtcctg
gagatgccctcaggcactgggaagacagtgtccctgttggccctgatcatggcgtaccag
cgggcgtatcccctggaggtgactaaactcatctactgctcgaggactgtgcctgagatt
gagaaggtgattgaagaacttcgaaagttactcagcttctatgagaaacaggagggcgag
aagctgccatttttggggctggctctgagctcccggaagaacctgtgtattcatcccgag
gtgacgcccctgcgctttgggaaggacgtggatgggaaatgccacagcctcacggcatcg
tacgtgcgggcacagtaccagcgggactccagcctgccccactgccgcttctacgaggaa
tttgatgtccacgggcgccaggtgcccctccccacgggcatctacaacctggatgacctg
aaggctgtgggacggcgccagggctggtgcccgtacttcctggcccgatactcaatcctg
cacgccaacgtggtggtctacagctaccactacctgctggaccccaagattgctgacctg
gtgtccaaggagctggcccgcaaggccgtggtcgtctttgatgaggcccacaacatcgac
aacgtctgcatcgactccatgagcgtcaacctcacccgccgcaccctggatcggtgccag
gccaacctggagaccctgcagaagacggtgctcagaatcaaggagacggacgagcagcga
ctgcgagaggagtaccgccgcctggtggaggggctgcgggaggccagcgctgcccgggag
accgatgcccacctggccaaccccgtgctgcctgacgaagtgctaaaggaggcggtgcct
ggctccatccgcacggccgagcacttcctgggcttcctgcgccgcctgttggagtacgtc
aagtggcgcctgcgggtgcagcatgtggtccaggagagcccgcccgccttcctcagtggc
ctggcccagcgcgtatgcatccagcgcaagcccctcaggttctgcgccgagcgcctccgc
tccctcctgcacaccttggagatctcagacctcactgacttctccccactcaccctcctc
gctaacttcgccacgctcgtcagcacctatgccaagggtttcaccatcatcatcgagccg
ttcgatgacaggaccccgaccattgccaaccccatcctgcacttcagctgcatggacgcc
tcactggccatcaaacctgtgtttgagcgcttccagtccgtcatcatcacatctgggaca
ctgtccccactggacatctaccccaagatcctggacttccaccctgtcaccatggcaacc
ttcaccatgacgttggcccgggtctgcctctgccccatgatcatcggccgtggcaatgac
caggtggccatcagctccaagtttgagacccgggaagatattgcggtgatccggaactat
ggaaatctcctgctggagatgtccgccgtggtccctgacggcatcgtggccttcttcacc
agctaccaatacatggagagcactgtggcctcctggtacgagcagggcatcctggagaac
atccagaggaacaagctgctcttcatcgagacccaggatggggctgagaccagcgtcgcc
ctagagaagtaccaggaggcctgcgagaacggccgcggggccatcctgctctccgtggcc
cgaggcaaggtgtccgagggaatcgactttgtgcaccactacgggcgggccgtcatcatg
ttcggggtgccctacgtgtacacccagagccgcattctcaaggcacggctggaatacctt
cgggaccagttccagattcgtgagaatgactttctcacctttgatgccatgcgccatgct
gcccagtgtgtgggtcgggccatcaggggcaagacggactatggcctgatggtctttgcc
gacaagcggtttgctcgggctgacaagcgggggaagctaccccggtggatccaggagcac
ctcacggacgccaacctcaacctgaccgtcgacgagggggtccaagtcgccaagtacttc
ctgaggcagatggcacagcccttccaccgggaggaccagctgggcctgtccctgctcagc
ctggagcagctggagtcagaggagacgctgcggaggatcgagcagattgcccagcagcta
tag
DBGET
integrated database retrieval system
