Bos javanicus (banteng): 133231699
Help
Entry
133231699 CDS
T11659
Symbol
SMG8
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG8
KO
K18734
protein SMG8
Organism
bjv Bos javanicus (banteng)
Brite
KEGG Orthology (KO) [BR:
bjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bjv03019
]
133231699 (SMG8)
Messenger RNA biogenesis [BR:
bjv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
133231699 (SMG8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
133231699
NCBI-ProteinID:
XP_061246160
LinkDB
All DBs
Position
19:11478692..11483849
Genome browser
AA seq
995 aa
AA seq
DB search
MAGPVSLRELLMGASAWTSSESPEGSPTEGGGSAAGGPEPPWREDEICVVGIFGKTALRL
NSEKFSLVNTVCDRQVFPLFRHQDPGDSGAGIRTEAGAVGEAGGAGDPGAGAGAGAGDPV
RGGVTAAEGTRTEPGSQDYSLLQAYYNQESKVLYLLLTSICDNSQLLRACRALQSGEAGG
GLSLPHAEAHEFWKHQEKVQCLSLLYLFSVCHILLLVHPTCSFDITYDRVFRALDGLRQK
VLPLLKTAIKDCPVGKDWKLNCRPCPPRLLFLFQLNGALKVEPPRNQDPAHPDKPKKHSP
KRRLQHALEDQIYRIFRKSRVLTNQSINCLFTVPANQAFVYIVPGSQEEDPVGMLLDQLK
SHCTVKDPESLLVPAPLSGSRRYQVMRQHSRQQLSFHTDTSSSSSSGQLVDFTLREFLWQ
HVELVLSKKGFDDSVGRNPQPSHFELPTYQKWISAASKLYEVAIDGKEEDPASPTGELTS
KILSSIKVLEGFLDIDTKFSENRCQKALPMAHSAYQSNLPHNYTMTVHKNQLAQALRVYS
QHARGPAFHKYAMQLHEDCYKFWSNGHQLCEERSLTDQHCVHKFHSLPKSGEKPEADRNP
PVLYHNSRARSTGACNCGRKQAPRDDPFDIKAANYDFYQLLEEKCCGKLDHINFPVFEPS
TPDPAPAKNESSPAPPDADADKLKEKEPQTQGESTSLSLALSLGQSTDSLGTYPADPQAG
GDNPEVHGQGEVKTEKRPNLVDRQASTVEYLPGMLHSNCPKGLLPKFSSWSLVKLGPAKS
YNFHTGLDQQGFIPGTNYLMPWDIVIRTRAEDEGDLDTNSWPAPNKAVPGKRSAVVMGRG
RRRDDIARAFVGFEYEDSRGRRFMCSGPDKVMKVMGSGPKESALKALNSDMPLYILSSSQ
GRGLKPHYAQLMRLFVVVPDAPLQIILTPQVQPGPPPCPVFYPEKQEITLPPDGLWVLRF
PYAYVTERGPCFPPKENVQLMSYKVLRGVLKAVTQ
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcccgtcagcttaagagagcttctaatgggcgcttcagcctggacaagctct
gagagtcccgagggatcccctacagagggtggtgggagcgcggctggcggaccggagcct
ccttggcgggaggatgagatctgcgtggtgggaatcttcggcaaaacggctctgcgcctg
aattccgagaagttttcacttgtgaacacggtgtgcgaccgacaggtctttcccctcttt
cgccaccaagatcctggagattcgggggctggaatcaggaccgaggctggggccgtcggg
gaggctggcggagccggggaccctggggctggggccggggccggggccggggatccagtt
cggggaggtgtaactgccgcggaaggcacccgaactgagccaggttcccaggattacagc
cttctgcaagcctattacaaccaggaaagcaaagttctgtaccttcttcttacttccatc
tgtgacaattcccagcttctgcgggcttgtcgggcccttcagagcggggaagctggaggt
ggcctctctttacctcatgcagaagcgcacgagttctggaagcatcaagagaaggtgcag
tgcctcagtctcctttaccttttctccgtctgtcacatcctgcttctggtccatcccact
tgttcctttgacatcacttatgatcgagtattcagagccctggatggactgagacagaaa
gtactgccccttctcaaaacagctattaaggattgtccagttggtaaagactggaaacta
aactgccgcccttgcccacctagactccttttcctttttcaactcaatggagcactcaag
gtagaaccccctcggaaccaagacccagctcatccagataagcccaagaagcattctccc
aaaaggagactgcagcatgccctggaggaccagatctatagaatcttccggaagagtcgt
gtcttgactaatcagagtatcaactgcctctttactgtacctgccaatcaagcttttgtg
tacatagttcccggaagccaggaggaggatccagtaggcatgttgctggaccaacttaag
agtcattgtactgtgaaagaccctgaatctttgttggtccctgcaccactttctgggtcc
aggcgataccaggtgatgaggcagcacagcagacaacagctttctttccacactgacacc
agcagttccagttcttcggggcagctagtggatttcacgctgcgagagttcctatggcag
catgtagagctagtactaagcaagaaaggttttgatgacagtgtgggcaggaacccacag
ccttcccattttgaacttcctacttatcagaagtggatctcagcagcttcaaaactgtat
gaagtagctattgatgggaaagaggaggacccagcatctcccactggggagttaacatct
aagattttaagcagtattaaagtcttggaaggatttttggatattgacacaaaattctca
gagaaccgttgccaaaaagctttaccgatggcccatagtgcctaccagtcaaatttgcct
cataattacacaatgactgtccacaagaatcagcttgcccaggctcttcgagtgtacagc
caacatgctaggggtccagcctttcacaagtatgccatgcagttacacgaagactgctac
aagttttggagcaacggccatcagctctgtgaggagaggagtttaactgatcaacactgt
gtacacaaatttcactccttacctaaatcaggagaaaaaccagaggctgatagaaatcct
cctgtgctgtatcacaatagccgagctcgatccactggtgcctgtaactgtggaaggaaa
caggcaccccgagacgatccctttgatatcaaggcagctaactatgacttttatcagctt
ctggaagaaaaatgttgtggaaaattggatcacatcaatttcccagtatttgaaccaagt
actccagatcctgctcctgccaaaaatgaatcatctcctgctcccccagatgcagatgct
gataaacttaaagagaaagaacctcaaacccaaggagagagcacaagcctgagtttagct
ttgagtttaggccagtctactgatagtttaggtacctatccagccgatccacaagcagga
ggagataatccagaagttcatggccaaggtgaagtaaaaactgagaagagaccaaacttg
gttgatcggcaggcatccacagttgaatatctcccaggcatgcttcattccaattgcccc
aaaggtctcctacccaaattctccagctggtctttggttaaactaggccctgctaagtct
tacaactttcatactggtttggaccaacagggcttcattccaggaacaaactatcttatg
ccttgggacattgtcatcaggactagagctgaagatgaaggagacttagacacgaattct
tggcctgctccaaataaggctgttcctggtaagagaagtgcagttgtcatgggcagagga
agacggcgagatgacatagcgcgagcgtttgtgggctttgaatacgaagactctcgaggt
cgaagatttatgtgctcaggacctgacaaagtaatgaaagtaatgggaagtggccccaag
gaatcagctttaaaagccctgaatagtgacatgcccttgtatattctgtcatcctctcag
ggtagagggctgaaaccacattatgctcaacttatgaggctttttgttgtggttcctgat
gctcctttgcagataatcttaacgcctcaggttcagccaggcccaccaccatgtccagta
ttctacccagaaaagcaagaaatcactctcccacctgatggcctctgggttttgaggttt
ccttacgcctacgtgactgagcgaggaccttgtttccctccgaaggaaaacgtgcaattg
atgagttacaaggtgctccgtggggttcttaaagcggtaacacaataa
DBGET
integrated database retrieval system
