Bos javanicus (banteng): 133241164
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Entry
133241164 CDS
T11659
Symbol
RORC
Name
(RefSeq) nuclear receptor ROR-gamma isoform X1
KO
K08534
RAR-related orphan receptor gamma
Organism
bjv Bos javanicus (banteng)
Pathway
bjv04659
Th17 cell differentiation
bjv04710
Circadian rhythm
bjv05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
bjv00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
133241164 (RORC)
09159 Environmental adaptation
04710 Circadian rhythm
133241164 (RORC)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
133241164 (RORC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bjv03000
]
133241164 (RORC)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
bjv03310
]
133241164 (RORC)
Transcription factors [BR:
bjv03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
133241164 (RORC)
Nuclear receptors [BR:
bjv03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
133241164 (RORC)
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
133241164
NCBI-ProteinID:
XP_061262295
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All DBs
Position
3:19065746..19090591
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AA seq
611 aa
AA seq
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MQKGQCPSCHLFCLSSRPQTLFLPSLPVSPPDVGTLCQPLLSPACCRARCSLLLSLPSPG
PCSLPSWAARAARTAPRELPHGQGPTETSPSLAGDGGSCPASKDDKELLAAKKTHTSQIE
VIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQCNVAYSCTRQQNCPIDRTSRNRCQHCR
LQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQKQLQQRQQQQREQAAKTPPVGAQGADTL
ACTLGLPDGQLPLGSSPDLPEASACPPSLLRAPGCGPSYSNSLAKTGLNGASYHLEYSPE
RGKAEGRENFYGTGSQLAPDRGGLHSEDPRRPGPGEPGRGLDSYFTPSFRSTPEVPYASL
TEIEHLVQNVCKSYRDTCQLRLEDLLRQRSNIFSREEVAGYQRKSMWEMWGRCAHRLTEA
IQYVVEFAKRLPGFMELCQNDQIVLLKAGAMEVVLVRMCRAYNADNDTVFFEGKYGGVEL
FRALGCSELISSIFDFSRSLSALRFSEDEIALYTALVLINANRPGLQEKRKVEQLQCNLE
LAFHHHLCKTHRQGILAKLPPKGKLRSLCSQHVEKLQTFQHLHPIVVQAAFPPLYKELFS
TEIESPEGLSK
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaggccagtgcccttcctgtcacctattctgtctctcctcaaggccccagact
ctgttcctcccatctctccctgtgtcccctcctgatgtcgggacgctctgccagccactc
ctttcccctgcctgctgtcgggccaggtgctccctcctcctctctcttccctcccctggg
ccctgctccctgccctcctgggcagccagggcagcaaggacggcaccaagggagttgccc
catggacagggccccacagagacatcaccgagcctcgcaggcgacggaggaagctgtcct
gcctctaaagatgacaaagagctgctggctgcaaagaagacccacacctcacaaattgaa
gtgattccgtgtaaaatctgtggggacaagtcatctgggatccactacggggttatcacc
tgtgaggggtgcaagggcttcttccgccggagccagcagtgcaacgtggcctactcctgc
acccgccagcagaactgccccatcgaccgcacgagccgcaaccgatgccagcactgccgc
ctgcagaagtgcctggccctgggcatgtcccgagatgctgtcaagtttggccgcatgtcc
aagaagcaaagggacagcctgcatgcagaggtgcagaaacagctgcagcagcggcaacag
cagcaacgggaacaagcggccaagacccctcccgtgggagcccaaggagcagacaccctc
gcctgcaccttggggctcccggatgggcagctacccctgggctcctcgcctgacctgcca
gaggcctcagcctgtccccctagtctcctgagggctccaggctgtgggccctcctactcc
aacagcctggccaagaccgggctcaacggggcctcgtaccacctggaatacagccctgag
cggggcaaggctgagggcagggagaacttctatggcacaggcagccagctggccccagac
aggggtggacttcactctgaggaccccaggcgtcctgggcctggggagccaggacggggc
ctggacagctacttcacccccagtttccgcagcaccccagaggtgccttatgcttccctg
acggagattgagcacctggtgcagaacgtttgcaagtcctaccgggacacgtgtcagctg
cggctggaggacctgctccgtcagcgctccaatatcttctcacgagaggaggtggctggc
taccagaggaagtcgatgtgggagatgtggggacgctgtgcccaccgactcaccgaggcc
attcagtatgtggtggagttcgctaagaggctcccgggctttatggagctctgccagaac
gaccagatcgtgctactcaaagcaggagccatggaagtggtgctggtcaggatgtgccgg
gcctacaatgctgacaatgacacagtcttttttgaaggcaaatacggtggcgtggagctg
ttccgagccttgggctgcagtgaactcatcagctccatctttgacttctcccgctccctg
agtgccttgcgcttttcagaggacgagatcgccctctacacagccctcgtcctcatcaat
gccaaccggccagggctccaagagaaaagaaaagtagaacagctgcagtgcaatctggag
ctggcctttcatcatcatctctgcaagactcatcgccaaggcatcctggcaaagctgcca
cccaaggggaagctgcggagcctgtgtagccagcacgtggaaaagctgcaaaccttccag
catctccaccctatcgtggtccaagctgctttccctccactctacaaggaactcttcagc
actgaaattgagtcacccgagggcctgtccaagtga
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