Bos javanicus (banteng): 133248237
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Entry
133248237 CDS
T11659
Name
(RefSeq) THO complex subunit 2-like
KO
K12879
THO complex subunit 2
Organism
bjv Bos javanicus (banteng)
Pathway
bjv03013
Nucleocytoplasmic transport
bjv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bjv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133248237
09122 Translation
03013 Nucleocytoplasmic transport
133248237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bjv03019
]
133248237
03041 Spliceosome [BR:
bjv03041
]
133248237
Messenger RNA biogenesis [BR:
bjv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
133248237
Spliceosome [BR:
bjv03041
]
Complex C
Other components
EJC/TREX
133248237
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
133248237
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
133248237
NCBI-ProteinID:
XP_061274071
LinkDB
All DBs
Position
1:complement(114329218..114335543)
Genome browser
AA seq
1584 aa
AA seq
DB search
MLGTSAFPTTSGSASATGKGKMAAVTVVVPVEWIKNWEKSGRGEFLHLCRILSENKSLDS
STYRDFQQALYELSYHVIKGNLKHEQASNVLSDISEFREDMPSILADVFCILDIETNCLE
EKSKGDYFTQLVLACLYLVSDTVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQ
QKFNLLREENEGYAKLIAELGQDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFE
CRPEQDDFFISLLESYMSMCEPQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQFNLI
DLDDLYVHLLPADNCIMDEHKREIVEAKQIVRKLTMVVLSSDKIDEREKEKEKEEEKVEK
PPDNQKLGLLEALLKIGDWQHAQSIMDQTPPYYAASHKLIALAICKLIHITIEPLYRKVG
IPKGAKGSPVSALQNKRAPKQAESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSF
MKEFQSDGRKQEDKEKTEVILSCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQH
RYRLYGQWKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTIL
FDYILSQIQKYDNLIAPVVDSLKYLTSLNYDILAYCIIEALANPEKEKMKHDDTTISSWL
QSLASFCGAVFRKYPIDLAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQ
LEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHALALPLCLLMAQQRNGIIFQESG
EKHLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKQVPSIDVLCNEFHTPHDAAFFLSR
PKYAHRILSKYDELKKSEKGSKQQHKVHKYITSCEMVMAPVHAAVVSLHVSKVWDDISPQ
FYATFWSLTMYDLAAPHTSYEREVNKLKIQMKAIDDNQEMPPNKKKKEKERCTALQDKLL
EEEKKQMEHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARF
VELVHQQKTPNFSTLLCYDRVFSDIIYTVSSCTENEASRYGRFLCCMLETVTRWHSDRAT
YEKECGNYPGFLTILRATGFDGGNKADQLDYDNFRHVVHKWHYKLTKASVHCLETGEYTH
IRNILIVLTKILPWYPKVLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSY
MIPENEFHHKDPPPRNAVASVQNGPGAGPSSSSIGSVSKLDESSAEDTDKSRERSQCGVK
AVNKASSATPKGNSNNGNSGSNSSKTVKENDKEKGKEKEKEKKEKTPTTTPEARVLGKDG
KEKPKEERPNKDEKAREMKERTPKSDKEKEKFKKEEKAKDEKFKTTVPNVESKSTQEKER
EKELSRERDTAKEMKSKENVKGGEKTPVSGFLKSPVPRSDIAEPEREQKRRKIDTHPSPS
HSSTVKDSLIELKESSAKLYINHTPPPLSKREMDKKDLDKSRERSREREKKDEKDKKERK
RDHLNNDREVPLDLTKRRKEENGTMGVSKHKSESSCESPYPNEKDKEKNKSKSSGKEKGG
DSFKSGKMDKISSGGKKGVDRSLS
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atgctcgggaccagcgccttccctacaacttccggttccgcctctgctactggtaagggg
aagatggcggccgtaactgtggtggttcctgtagagtggataaagaactgggagaaatca
gggagaggcgaatttttacatttatgccggatcctcagtgaaaataaaagcctcgatagt
tcaacttatagagatttccagcaagctctttatgaattatcataccatgtcattaaagga
aatctaaagcatgaacaggcatctaatgttcttagtgacattagtgaatttcgtgaggat
atgccctccattcttgctgatgtattctgcatattagatatcgagacaaattgtttagaa
gaaaaaagcaagggagactattttacacaattggtattagcatgtttgtatttagtttca
gacacagttctaaaggaacgcttggatccagaaacattggaatcgttagggcttatcaaa
caatcacagcaattcaatcaaaagtcagttaaaatcaagacaaaactcttttataagcag
caaaaatttaatttgttaagagaagaaaatgaaggttatgccaagctgattgctgaattg
gggcaagatttatctggaaatattactagtgatttaatcttagaaaatatcaaatcttta
ataggatgctttaatctggatcccaatagagttctggatgtcattttagaagtgtttgaa
tgcaggccggaacaagatgacttctttatatctttattagaatcttacatgagtatgtgt
gagccgcaaacactgtgtcatattcttgggttcaaattcaagttttatcaggaaccaaat
ggagagactccttcatctttatacagagttgcagcagtacttctacaatttaaccttatt
gatttagatgatctttatgtacatcttcttccagctgataattgcattatggatgaacac
aagcgagaaattgtagaagctaagcagatcgttagaaaacttacaatggttgtattgtct
tctgataaaattgacgagcgagagaaagaaaaggaaaaagaagaggagaaagtggagaag
ccacctgacaaccaaaaacttggtttgttggaagccttgttaaagattggtgattggcag
catgcgcagagcattatggatcagacgcctccatactatgcagcttcacataaactaata
gcccttgctatttgcaagctgattcatataactattgagcctctctaccgaaaagttggc
attcctaaaggtgctaaaggctcacctgttagtgctttgcaaaataagagagcgccaaaa
caagcagagagctttgaagatttgaggagagacgtcttcaatatgttctgttaccttggt
ccccacctttctcacgatcccattttatttgctaaagtggtgcggataggcaagtcattt
atgaaggagtttcagtctgatggacgcaaacaagaagataaagagaaaacggaagttatc
cttagctgtttgcttagcattactgaccaggtattacttccatctctttctttgatggac
tgcaatgcttgtatgtctgaggaactatgggggatgtttaaaacatttccatatcagcat
agatatcgtctgtatggccagtggaagaatgaaacttacaacagtcatccacttttagta
aaagttaaagctcaaacaatagacagagccaaatatatcatgaagcgtctaaccaaggaa
aatgtgaagccttctggaagacaaattgggaagctgagccacagcaatccaaccattttg
tttgattacatcttgtcacaaatacagaagtatgataacttgatagcacctgtagtagat
tcattgaaatacctcacttcgttgaattatgacatcttggcctattgtatcattgaagct
ttagctaatccagaaaaggagaaaatgaaacatgacgacacaaccatctcaagttggctt
cagagtctggctagtttctgtggtgcagtttttcgtaaatatccaattgatcttgctggt
cttcttcagtatgtggctaatcagctaaaggcaggcaaaagttttgacctgcttatactg
aaagaagtggtacaaaaaatggcaggaatagaaattacagaagaaatgacaatggagcaa
ctagaagccatgactggtggagaacaactaaaagctgaaggtggttattttggccagata
agaaacactaaaaaatcctcccagagattaaaggatgcactattagaccatgctcttgct
cttcctctctgcttgcttatggctcagcagaggaatgggataatctttcaggaaagtgga
gagaaacatttgaaacttgtgggaaaactctatgatcagtgtcatgataccctggtacag
tttggtgggtttttagcatctaatctaagcacagaagattatataaagcaagtgccttca
attgatgtgctctgtaatgaatttcacacacctcacgatgcagcatttttcctgtctagg
ccaaagtatgcacaccgtattttgtcaaagtatgacgaacttaaaaaatcagagaaggga
agtaaacagcagcataaagttcataagtacatcacatcatgtgaaatggtgatggctcct
gttcatgcagcagtggtttccttacacgtttccaaagtctgggatgacatcagtcctcaa
ttctatgccacattctggtcattgacaatgtatgaccttgcagctccacataccagctat
gaacgggaagtcaataaacttaaaatccagatgaaagcaattgatgataaccaggaaatg
cctccaaataaaaagaaaaaagagaaggagcgatgtactgcccttcaggacaagcttctc
gaagaagaaaagaaacagatggaacatgtacagcgagttctgcagagactgaaactggaa
aaggacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaatttctacag
ctgtgtatatttcctcgatgtattttttcagcaattgatgctgtttactgtgctcgtttt
gttgaattggtacaccaacagaaaactccaaatttttccacgcttctttgctatgatcga
gttttctctgatataatttacacagtctcaagctgtactgaaaatgaagctagtcgatat
gggagattcctttgctgcatgttagagactgtgaccaggtggcacagtgatagagccacg
tatgaaaaggaatgtggaaattatccaggattccttactatattacgagcaactggattt
gatggtggaaataaagctgatcaattagactatgacaattttcgacacgttgtacataaa
tggcactacaaactgaccaaggcatcggtacattgccttgaaacaggcgaatatacgcac
atcaggaatatcttgattgtgctaacaaaaatacttccttggtacccaaaagttttgaat
ctgggtcaagctttggaaagaagagtgcataaaatctgccaagaggaaaaagagaagagg
ccagatctatatgcattggctatgggctactctgggcagttgaaaagtagaaagtcatac
atgatacctgaaaatgagtttcatcacaaagacccccctccaaggaatgcagttgccagt
gtacaaaatgggcctggtgctgggccttcttcatcgtcgatcggaagtgtgtctaagttg
gacgaaagcagtgccgaggacactgataaatcaagggagagatctcagtgtggtgtgaaa
gctgttaataaagcttctagtgccacaccaaaagggaattcaaataatggaaatagtggt
tctaacagcagcaaaactgttaaagaaaatgacaaagaaaaaggaaaagagaaagaaaaa
gagaaaaaagaaaagactccaactactactccagaggcccgagtacttggcaaagatggt
aaagaaaaaccaaaggaagaacggccaaataaagatgaaaaagcaagagagatgaaggaa
agaacacctaaatctgacaaagagaaagaaaaattcaagaaggaagaaaaagctaaagat
gagaaattcaagaccactgtcccaaatgtagaatcaaagtcaactcaagaaaaggaaaga
gagaaggagctgtccagagaacgagatacagcaaaggaaatgaaatcaaaggaaaatgtt
aaaggaggagagaaaacaccagtttctgggttcttgaagtcacctgttccccgatcagat
attgcagagcctgaaagggaacagaaacgtcgcaaaattgatacccatccttctccatca
cattcctcaacagtaaaggacagtctcatcgaactcaaagagtcttcagcaaagctctac
attaatcatactcctccaccactgtccaagagagaaatggacaagaaagatttggacaag
tcaagggaaagatccagagaaagagaaaaaaaggatgaaaaggacaagaaagagcggaaa
agggatcacttaaacaatgaccgagaagtgccactggacttaaccaagaggcggaaagag
gaaaatggaacaatgggggtttcaaaacacaaaagtgaaagttcatgtgagtctccttat
ccaaatgagaaagacaaggaaaaaaataagtcaaaatcttcaggcaaagaaaaaggcggt
gactcatttaaatctggaaagatggataaaatctcctctggtggcaaaaagggtgtggac
agatccctaagctga
DBGET
integrated database retrieval system
