Bos javanicus (banteng): 133250001
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Entry
133250001 CDS
T11659
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
bjv Bos javanicus (banteng)
Pathway
bjv03030
DNA replication
bjv03410
Base excision repair
bjv03420
Nucleotide excision repair
bjv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bjv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
133250001 (RFC1)
03410 Base excision repair
133250001 (RFC1)
03420 Nucleotide excision repair
133250001 (RFC1)
03430 Mismatch repair
133250001 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bjv03032
]
133250001 (RFC1)
03400 DNA repair and recombination proteins [BR:
bjv03400
]
133250001 (RFC1)
DNA replication proteins [BR:
bjv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
133250001 (RFC1)
DNA repair and recombination proteins [BR:
bjv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
133250001 (RFC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
BRCT_2
AAA_14
RuvB_N
AAA_5
Rad17
AAA_7
AAA_18
AAA_16
AAA_30
nSTAND3
AAA_17
AAA_33
RNA_helicase
AAA_19
NTPase_1
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
133250001
NCBI-ProteinID:
XP_061277169
LinkDB
All DBs
Position
6:complement(58765035..58842242)
Genome browser
AA seq
1144 aa
AA seq
DB search
MDIRKFFGVIPSGKKLVSETVKKNEKTKSAEESLKAKKGIKEIKVNSSCKEDEFKPKQSN
KKKRIIYDSDSESEETVQVKNAKKRPEKLPRSSKLAKIQQQDPVTYISETDEDDDFVCKK
TASKLKENGGSTNSYLGASNMKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSIQRSDKK
MVASRRKEPSQNADDSRLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKAKK
AEKDAEERETFSSVQVNLCKAEKPKYPHKEQFSDERKNFSPKKQTKCEGSRQSQQRSRSS
VHKTGETSPKASSKLALLKKKEESSNKETESMASKRKENVIELKETRTPKKMKSSPAKKE
SVSPDEAEKRRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESIERDE
AKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTNIIDEDGLLNLIRTMPGK
KSKYEIAAEAEMKKEKSKLERTPQKNDQGKRKSSPTKKESESKKCKLTPKRESSIKSLKK
EASVSQRGLDFKEQAAEETNGDSRARNLADDSRESKVESLLWVDKYKPTSLKTIIGQQGD
QSCANKLLRWLQNWHKSPSEDKKHAAKFGKFAGKDDGSSFKAALLSGPPGVGKTTTASLV
CQELGYSYVELNASDTRSKNSLKEIVAESLNNTSIKGFYSSGTVHSVGTRHALIMDEVDG
MAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAM
MSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLNMWCARNKALTYDQAKADSHRAKKDI
KLGPFDVARKVFVSGEETAHMSLMDKSDLFFHDYSIAPLFVQENYIHVKPVAAGGDMKKH
LMLLSRAADSICDGDLVDRQIRNKQNWSLLPTQAIYASVLPGELMRGYMTQFPTFPSWLG
KYSSMGKHDRTVQDLALHMSLRTYSSKRTVNMDYLSHIRDALVQPLASQGIEGVQDVVAL
MDAYYLMKDDFENIMEISSWGGRPSPFSKLDPKVKAAFTRAYNKEVHLTPYSLQAVKTHR
HSTGPSLDSEYNEELNEDDSQSDEKDQDTLETDAMIKKKTKSSKPSKSEKDKESRKGKGK
STKK
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggatattcgaaaattctttggggttataccaagtggaaagaaacttgtaagtgaaaca
gtaaagaagaatgagaaaacaaagtctgctgaagaaagtttaaaagcaaagaaaggaata
aaggaaatcaaggtaaatagttcttgtaaagaagatgaattcaagccgaagcagtcaaac
aagaaaaagaggatcatctatgattcggattcagaatcagaggaaacagtacaggtaaaa
aatgccaaaaagcgaccggaaaaattgccacggtcttctaaacttgctaaaatccaacag
caggatcctgttacgtacatttcagaaacagatgaagatgatgactttgtgtgtaagaag
acagcctctaaattaaaagaaaatggaggatctacaaatagttatcttggagcatcaaac
atgaaaaagaatgaggaaaacactaagaccaagaataagcctttgtcaccaataaaactt
acccccacatcagtgcttgattattttggaactggaagcatccaaagatcagataagaag
atggtggcaagcagaagaaaagagccttcacaaaatgcagatgattccagattaaatgat
gaagccatcgccaagcaattacaacttgatgaagatgcagagctggagagacaactgcat
gaagatgaagagtttgccagaacgttggccatgttggatgaagaacccaaggccaaaaag
gctgaaaaggatgcagaagaaagagagacattttcatctgtacaagtcaatttatgtaaa
gcagagaaacctaaatatcctcataaagaacaattttcagatgaaagaaagaacttcagc
cctaagaagcaaactaagtgtgaaggttcaagacaatcccagcaacgttccaggtcatca
gttcataaaacaggagaaacttctccaaaagccagttctaagctggcacttttgaaaaaa
aaagaagagagttctaataaagaaacagagtctatggcctcaaaaagaaaagaaaatgtt
attgagttaaaagagacaagaactcctaagaaaatgaaaagttctccagctaaaaaagag
tctgtaagtcctgatgaggctgaaaagagacgcactaattatcaagcttaccgaagctac
ttgaatcgagaaggtcccaaagctctgggctccaaagaaataccaaagggagctgaaaat
tgcttggaaggccttacgtttgtaatcacaggagtgctggagtccattgaacgagatgag
gccaagtctctaattgagcgttatgggggaaaagtgacaggaaatgtcagcaagaaaacc
aactatctggtcatgggtcgtgacagtggccaatccaagagtgacaaggcagcagccttg
ggaacaaatattattgatgaagatggcctgttgaatctgattcgaactatgccaggcaag
aagtccaagtatgaaatagccgctgaagctgagatgaagaaagaaaaatccaaattggaa
agaacaccccaaaaaaatgatcaaggaaaaagaaaaagtagtccaactaagaaggaatca
gaatctaaaaagtgcaaactgactcccaaaagggaaagctctataaagtcactaaaaaag
gaagcaagtgtgtctcagagaggcctggacttcaaggagcaggcggctgaggagacaaat
ggtgacagccgggctaggaatttggctgatgacagcagagaaagcaaagtggaaagtttg
ctctgggtggataagtataagccaacctcgctcaagaccataattggacagcaaggtgac
cagagctgcgccaacaaactcctgcgctggctccaaaactggcacaagagtccatccgaa
gataagaaacacgcggcaaaatttggtaaatttgctggcaaagatgatggctccagtttt
aaagcggcattgctctcaggtcctcctggtgttggcaaaacaaccacagcttctctggtt
tgtcaggaattgggatatagctatgtggaactgaatgcaagtgacactcggagtaagaac
agtttgaaggagattgttgctgagtcgctgaataataccagcatcaaaggcttttattca
agtggaacagtccattcagtaggcacgaggcatgctctcatcatggatgaagtagatggc
atggctggcaatgaggacaggggaggaattcaggaattaattggcctgataaaacataca
aaaattcccattatttgtatgtgcaatgatagaaatcatcccaagattcgctctttggtt
cattattgttttgatcttcgttttcaaagacctcgggttgaacagattaagggtgctatg
atgtctattgcatttaaagagggtctaaagatcccccctccagctatgaatgaaataatt
ttgggagctaatcaagatatcagacaggttttacacaatctgaatatgtggtgtgcacgg
aataaggcactaacctatgaccaggccaaggctgattctcatagagccaaaaaggacatc
aaactgggcccgtttgatgttgcccggaaagtgtttgtaagtggagaggagactgctcat
atgtcacttatggacaaatcagacctcttcttccatgattattcaatagcacccctcttt
gtccaggagaactacatacacgtgaagcccgtggctgcagggggtgacatgaaaaagcac
ttgatgcttttaagcagagcagcagacagcatatgtgatggtgacctagtggaccgtcaa
atccggaataagcaaaactggagtcttctgcccacacaggccatttatgccagtgttctt
cctggagagttaatgagggggtacatgacccagtttcctaccttcccaagttggttgggg
aagtactcatctatgggcaaacacgatcgtactgttcaggacctggctttgcatatgagt
ctcagaacttactccagcaaaaggacagtaaacatggattatctgtcacatataagagat
gcacttgtacagcccttggcctcacaagggatagaaggagtacaggatgttgttgctctt
atggacgcatattatttgatgaaagatgacttcgagaatattatggaaattagcagctgg
ggaggcagacctagtccgttctctaaactggatcccaaggtgaaagcagccttcacaaga
gcttacaataaagaagtccacctcactccgtattcactccaggcagtaaagacacacaga
cacagcacaggcccatctctggattctgaatacaatgaagagttaaatgaagatgactct
cagtctgatgagaaagaccaggacactttggaaactgatgctatgatcaagaaaaagaca
aaatcttcaaagccttcaaaatcagaaaaagataaggagtccagaaaaggaaaaggaaaa
agtacaaagaaatga
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integrated database retrieval system
