Bos javanicus (banteng): 133256113
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Entry
133256113 CDS
T11659
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
bjv Bos javanicus (banteng)
Pathway
bjv04140
Autophagy - animal
bjv04142
Lysosome biogenesis
bjv04145
Phagocytosis
bjv04148
Efferocytosis
bjv05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
bjv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
133256113 (VPS39)
04142 Lysosome biogenesis
133256113 (VPS39)
04140 Autophagy - animal
133256113 (VPS39)
04148 Efferocytosis
133256113 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133256113 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bjv04131
]
133256113 (VPS39)
Membrane trafficking [BR:
bjv04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
133256113 (VPS39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
LIF1_N
Beta-prop_RIG_2nd
VPS18_solenoid_2nd
DUF4145
Lgl_C
SAM_CEP-1_C
EcoR124_C
Motif
Other DBs
NCBI-GeneID:
133256113
NCBI-ProteinID:
XP_061286872
LinkDB
All DBs
Position
10:complement(37201830..37248936)
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AA seq
875 aa
AA seq
DB search
MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDVGCNRFEVTLEKSNK
NFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQHAETGD
EVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVD
GKGANKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCALNWTDIPVAME
HQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGSNIIYVASNHFVWRLIPVPM
ATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQKRFDESMQVFAK
LGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEKAHLALIDYLTQKRSQLVKKL
NDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEE
SEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENL
HLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLVENFKGLAIPYLEHVIHVW
EETGSRFHNCLIQLYCEKVQGLMKEYLLSFPAGKAPVPAGEEEGELGEYRRKLLMFLEIS
SYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHVLKDTRMAEEYCHKHYDQNK
DGNKDVYLSLLRMYLSPPSVHCLGPIKLELLEPQANLQAALQVLELHHSKLDTTKAINLL
PANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKV
CMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPADT
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgccttcgagccggtgccgattctagaaaagctgcctctgcagatcgactgt
ctggctgcctgggaggaatggctgcttgttggaacaaaacaaggtcatcttcttctctat
aggattcggaaagacgttggttgcaacaggtttgaagtgacattagagaaatccaataag
aacttctccaaaaagattcagcagatccatgtggtctcccagtttaagattctggtcagc
ttgttagaaaataatatttacgtccatgacctgttgacatttcaacaaatcactacggtt
tccaaggcaaagggagcatcattgttcacatgtgaccttcagcacgcagagactggggac
gaggtgttgcggatgtgtgtggccgtgaaaaagaagctgcagctctatttctggaaagac
agggaatttcatgagttgcagggggactttagtgtaccggatgtgcccaagtccatggca
tggtgcgaaaattctatctgcgtgggcttcaagagagactactacctaataagggtggat
ggaaagggggccaacaaagagctcttcccgacaggaaaacagctggaacccttagttgca
cctctggcggatggaaaagtagctgtgggtcaggatgatctcactgtggtgctcaatgag
gaggggatctgcacgcagaagtgtgccctgaactggaccgacatcccagtggccatggag
caccagcctccctacatcattgcagtgttgcctcgatatgtggaaatccggacatttgag
ccgaggcttctggtccagagcattgaactgcaaagaccccgtttcattacttcgggcgga
tcaaacattatctatgtggccagtaatcactttgtctggagactcattccagtccccatg
gcgacccaaatccaacagcttctccaggacaagcagtttgaattggctctgcagctcgca
gaaatgaaagatgattccgacagtgaaaagcagcaacagatccatcacatcaagaacttg
tatgccttcaacctcttctgccagaagcgttttgatgagtccatgcaggtctttgctaaa
cttggcacagatcctacccatgtgatgggcctgtacccagacctgctgcccacagactac
aggaagcagctgcagtatcctaacccactgcctgtgctgtctggggctgagctggagaag
gctcacttagctctaattgactacctgacacagaaacgcagccaattggtaaagaagctg
aatgactctgatcaccagtctagcacctcccctctcatggaagggactcctaccatcaaa
tccaagaaaaagctgctgcagatcattgacaccaccctgctcaagtgctaccttcatacg
aacgtggccctggtggcccccttgctgcgtctggagaacaatcactgccacatcgaagag
agtgagcacgtgctgaagaaggctcacaagtacagcgagctgatcatcctgtacgagaag
aaggggctccacgagaaagctctgcaggtgctggtggaccagtccaaaaaagcaaattcc
cctctgaaaggccatgagcggacagtgcagtacctgcaacatctgggcacagaaaatctg
catttaattttttcctactcggtgtgggtgctgagagactttccagaggatggtctgaag
atatttactgaggacctcccagaggtggagtctctgccacgagaccgagtgctgggcttc
ttagtggagaattttaagggtctggctattccgtatctggaacatgtcatccacgtttgg
gaggagactggctctcggttccacaactgcctgatccagttgtactgtgagaaggtgcaa
ggtctgatgaaggagtatctcctgtccttccctgcaggcaaagctccagtccctgctggt
gaggaggaaggagagctgggagaataccgacggaagctccttatgttcctggaaatttcc
agctactatgacccaggccggctcatctgtgattttccttttgatggcctcttggaagaa
cgtgccctcctgctgggacgcatggggaaacatgaacaagctctcttcatctacgtccac
gtcctgaaagacacgaggatggctgaagagtactgccacaagcattatgaccaaaacaaa
gatggcaacaaagatgtgtatctgtccctgctccggatgtacctgtcgccccccagcgtg
cactgcctggggccgatcaagctggaactgctggagccacaagccaacctccaggccgcc
ctgcaggtcctagagctgcaccacagcaagctggacaccaccaaggccatcaacctgctg
cccgcgaacactcagattaacgacatacgcatctttctggaaaaggtcttagaagagaat
gcacagaagaaacggttcaaccaagtgctcaagaaccttctccatgcagagttcctgagg
gtccaggaagagcgcatcctgcaccagcaggtgaagtgcatcatcacagaggagaaggtg
tgcatggtgtgtaagaagaagattgggaacagcgcatttgcaagataccccaatggggtg
gtcgtgcattacttctgctccaaagaggtcaacccggctgacacctga
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