Bos javanicus (banteng): 133257417
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Entry
133257417 CDS
T11659
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1 isoform X1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
bjv Bos javanicus (banteng)
Brite
KEGG Orthology (KO) [BR:
bjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bjv03041
]
133257417 (DDX1)
03016 Transfer RNA biogenesis [BR:
bjv03016
]
133257417 (DDX1)
Enzymes [BR:
bjv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133257417 (DDX1)
Spliceosome [BR:
bjv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
133257417 (DDX1)
Transfer RNA biogenesis [BR:
bjv03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
133257417 (DDX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
133257417
NCBI-ProteinID:
XP_061289251
LinkDB
All DBs
Position
11:complement(82539045..82579420)
Genome browser
AA seq
749 aa
AA seq
DB search
MTPSSYCVEQKNQSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSG
KTGAFSIPVIQIVYETLKDQQEGKKGKATIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC
QSREVKEWHGCRATKGLTKGKHYYEVSCHDQGLCRVGWSSMQASLDLGTDKFGFGFGGTG
KKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPAC
VLKNAELKFNFGEEEFKFPPKDGFVALSKAPESFVVKSQHTGSAQVAQTKFLPNAPKALI
VEPSRELAEQTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLD
DLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRIHNQIPQITSDGKRLQVIVCSATLH
SFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDEVHA
KDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGG
GPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT
LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTI
WYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRTLGGGNYKGHVDILAPT
VQELAALEKEAQTSFLHLGYLPNQLFRTF
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgacccccagctcatactgcgtcgaacagaagaaccagtcagagatgggtgttatgcct
gagattgcacaagccgtggaagagatggattggcttctcccaactgatatccaggctgaa
tcgatccccctcatcctaggaggaggtgatgtccttatggctgcagaaacaggaagtgga
aaaactggggctttcagtattccggttattcagatagtgtatgaaactctgaaagaccaa
caagaaggcaaaaaaggaaaagcgacaattaaaactggtgcttcagtgctgaacaaatgg
caaatgaacccatatgacagaggatctgctttcgcaattggctcagatggtctttgttgt
cagagcagagaagtaaaggaatggcatgggtgcagagccaccaaaggcctaacgaaaggg
aagcactactatgaggtatcctgtcatgaccaagggttgtgcagagttgggtggtcttcc
atgcaagcatccctagatctcggtactgacaagtttggatttggctttggtggaacaggg
aagaaatcccacaacaagcagtttgacaattatggagaggaattcactatgcatgatacc
attggatgttacctagatatagataaagggcatgtcaaattctccaaaaacggcaaagat
cttggtctggcatttgaaataccaccacatatgaagaaccaagccctgttccctgcctgt
gttttgaagaatgcggaactcaaatttaactttggggaagaagaattcaagtttccaccg
aaagatggtttcgttgccctttccaaggcgccggagagtttcgttgtcaagtcgcagcac
acaggtagtgcacaggtggcgcaaacaaagtttctccccaatgctccaaaagctctcatc
gtcgagccttcccgggagttggctgaacaaactctgaataacgtcaagcagtttaagaaa
tacatcgataatcctaagttaagggagcttctgataattggaggtgtcgcagcacgggat
cagctctctgttttggataatggggtggatattgtcgttggcactccaggaagactggat
gatttggtgtctaccggaaagctgaacttatcccaagttagattcctggtcctggatgaa
gctgatgggcttctttctcaaggttactctgactttatcaataggattcacaatcagatt
cctcagattacctctgatggaaaaagacttcaggtgattgtgtgctcagccactttgcat
tcttttgatgtgaagaaactgtctgagaagatcatgcactttcccacgtgggtcgatttg
aaaggagaggattccgtcccagatactgtccaccacgttgttgtcccagtgaaccccaaa
acggacaggctctgggaaaggcttgggaaaagccacattaggactgatgaagttcatgca
aaagataacacaagacctggtgctaacagtccagagatgtggtctgaagctattaaaatc
ctgaagggggagtatgctgtccgagccatcaaggaacacaagatggatcaagcaattatt
ttctgtagaaccaagatcgactgtgacaacctggagcagtattttatgcagcaaggagga
ggacctgataaaaagggacatcagttctcgtgtgtttgtcttcatggtgacagaaagcct
catgagaggaagcaaaacttggaaagattcaagaaaggagatgtcagattcttgatatgc
acagatgtagctgccagaggaattgatatccacggtgttccttatgtcataaatgtcacc
ttgcctgatgaaaaacaaaactatgtccatcgcattggcagagtaggaagagctgaaagg
atgggtctggccatttccctggtggcaacagaaaaagagaaggtttggtatcatgtatgt
agcagccgtggaaaagggtgttataacacaagactcaaggaagatggtggctgtaccata
tggtacaatgagatgcagttgctgtccgagatagaggaacacctgaactgtaccatttct
caggttgagccagatataaaagtaccagtagatgaatttgatgggaaagttacttacggc
cagaaaagaactcttggtggtggaaactataaaggccacgtggatattttggctcctacg
gttcaagagttggctgcccttgaaaaggaggcccagacatctttcctgcatcttggctac
cttcctaaccagctgttcagaaccttctga
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