Bos javanicus (banteng): 133258134
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Entry
133258134 CDS
T11659
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
bjv Bos javanicus (banteng)
Pathway
bjv03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
bjv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
133258134 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bjv01009
]
133258134 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bjv04515
]
133258134 (PCDH20)
Protein phosphatases and associated proteins [BR:
bjv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133258134 (PCDH20)
Cell adhesion molecules [BR:
bjv04515
]
Cadherins
Protocadherins
133258134 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Ig_CLSTN
Cadherin_CELSR2_9th
Ig_Cad99C_N
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
133258134
NCBI-ProteinID:
XP_061290408
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All DBs
Position
12:626786..634279
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AA seq
951 aa
AA seq
DB search
MRGGGDACGSRAGAVSWSRATWRPRPDMGSLSRPSSSASHGNLPHLLLFFLFVGPFNCLA
SYSRATEILYSLNEGLPAGVLIGSLAEDLRLLPSAGGQDLLSQSPQHSVAERNPPLSFSL
ASQGLSGQYVTLDNRSGELHTSAQEIDREALCLEGGGGIAWGRSISISSSPSADSCLLLL
DVLVLPQEYFRFVKVKIAIRDINDNAPRFPISQISVWVPENAPVNTRLAIEHPAVDPDMG
TNGVQTYRLLDYHRMFTLDVEENENGERTPYLIVMGLLDRETQDQYVSIIIAEDGGSPPL
IGSATLTIGISDINDNCPLFTDSQINITVYGNATVGTPIAAVQAVDRDLGNNAQITYSYS
QKVPQASKDLFHLNENTGVIKLFSKIGGSVLQTHKLTILANGPGCIPAVITALVTIIKVI
FRPPEIVPRYIANQIDGIIYLKELEPVNTPIAFFTIRDPEGKYKVNCYLDGEGPFRLLPY
KPYSNEYLLETTKPMDYELQQFYEIAIVAWNSEGFQVKKMIKVQLLDDNDNAPVFLQPLV
ELTIEENNAPNAFLTKLDATDADSGERGQVSYFLGPDAPSYFSLDSVTGILTVSTQLDRE
EKEKYRYTVRAVDSGKPPQESVATVVITVLDKNDNSPRFINKDFSFFVPENFPGYGEIGV
ISVTDADTGQNGWVALSVVNQSDIFVIDTGKGLLRAKVSLDREQQSSYTLWVEAVDGGTP
PLSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSLVTEVYAVDKDTGMNAVI
AYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVKVSDHGYPEPLHSTVMVN
LFVNDTVSNESYIENLLRKEPEISIEEKEPQISIEPTHRKAESVSCMPTLVALSVISLSS
ITFLTGMGIYICLRREKKHHREDENLEVQTPLKGKIDLHMRERKPMDISNI
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcggcggggatgcgtgcggctcacgggccggggcagtaagctggagtcgggcg
acctggcgcccgcgcccggatatggggagtctcagtcgtcctagcagcagcgccagccac
ggaaacctgccgcatctgcttctgttcttcctcttcgtgggaccgttcaactgtctggcg
agttacagccgggccacagagattctgtacagcctgaacgaggggctgccggcgggggtg
ctcatcggcagcctggcggaggacctgcggctgctgcccagcgcaggggggcaggacctg
ctgtctcagtcgcctcagcacagcgtcgccgagaggaaccctcctctctccttcagcctg
gcctcccaggggctgagtggccagtacgtgaccctagacaaccgctcaggggagctacac
acttctgcccaggagatcgaccgggaggccttgtgtcttgaaggaggcggagggattgcc
tgggggcgcagcatttccatctcctcttcgccttctgctgactcttgtcttttgcttctg
gatgtcctagtcctgcctcaggaatactttaggtttgtgaaggtaaaaatcgctatccgg
gacatcaatgacaatgccccgcggttccctatttcccaaatatcagtttgggtcccagaa
aatgcacctgtaaacacccggctggccatagagcatcccgcagtggacccagatatgggc
actaatggtgttcagacctaccggttgctggactaccatcgtatgttcaccctggacgtg
gaggagaatgagaatggggagcgcaccccctatctaattgtcatgggactgttggacaga
gagacccaggaccagtatgtgagcatcatcatagctgaggatggtgggtctccaccactg
ataggcagtgccaccctcaccattggaataagtgacattaatgacaattgcccactcttc
acagactcacaaatcaacatcactgtgtatgggaatgctactgtgggcacaccaattgca
gctgttcaggctgtggacagagacttgggaaacaatgctcagatcacctactcttacagt
cagaaagttccacaagcatccaaggatttattccatttgaatgaaaacaccggggtcatt
aaacttttcagtaagattggaggaagtgttctgcaaacacacaagctcaccatccttgct
aatgggccaggctgcatccctgctgtgatcactgccctggtgactattatcaaagtcatt
ttcaggccacctgaaattgtccctcgttatatagcaaatcaaatagatggtattatttac
ctgaaagaattggaacctgttaacactccaattgcattctttaccataagagatccagaa
ggtaaatacaaggtgaactgctatctggatggtgaaggaccatttaggttattgccctac
aaaccatacagtaatgagtatcttctagaaacgacaaaacctatggattatgagctacag
caattctatgaaatagccatagtagcttggaactctgagggatttcaagtcaaaaaaatg
attaaagtgcaacttttagatgacaatgataatgctcctgttttccttcaacccttggta
gaactaaccattgaagaaaataatgcacccaatgcctttttgactaagctagatgctaca
gatgctgacagtggagagaggggccaagtttcatattttctgggacctgatgctccatca
tatttttccttagacagtgtcacaggaattctgacagtttctactcagctggatcgagag
gagaaagaaaagtataggtacacagtcagagctgttgactctgggaagccaccccaagaa
tcagtagctactgtggttatcacagtgttggataaaaatgacaacagccctaggttcatc
aacaaggacttcagcttctttgtgccagaaaattttccaggatacggtgaaattggagta
attagtgtcacagatgccgatactgggcaaaacggatgggttgctctctccgtggtgaac
cagagtgatatttttgtcatagacactggaaagggcctgctgagagctaaagtctctttg
gacagagagcagcaaagctcctacactttgtgggttgaagccgttgatgggggtacgcct
cccctctcctctactgcaaaaatcacaattctccttctagacattaacgacaacccgcct
cttgttttatttcctcagtctaacatgtcttacttgttggtgttgccttctactctccct
ggctcactagttacagaggtctatgcagttgacaaagacacaggcatgaatgctgtcata
gcgtatagcatcatagggagaagagggcctaggcctgaatcctttagaattgaccctaaa
actggcaacattactttggaagaggcattgctgcagacagattatgggctccatcgttta
ttggtgaaagtgagtgatcatggttatccagaacctctccattccacagttatggtgaat
ctttttgtcaatgacactgtcagtaatgaaagctacattgagaatcttctaagaaaggaa
ccagaaattagcatagaggagaaagaaccacagatttcaatagaaccaactcataggaaa
gctgaatccgtgtcctgtatgcccacattagtagctctatctgtaataagcttgagttct
atcacattcttaacagggatgggcatatatatctgtttaaggagagagaagaaacaccat
agggaggatgaaaatttggaagtacaaactccattaaaaggaaaaattgacttgcatatg
agagagaggaaaccaatggatatttctaatatttga
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