Bos javanicus (banteng): 133259865
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Entry
133259865 CDS
T11659
Symbol
DDX27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27 isoform X1
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
bjv Bos javanicus (banteng)
Brite
KEGG Orthology (KO) [BR:
bjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bjv03041
]
133259865 (DDX27)
03009 Ribosome biogenesis [BR:
bjv03009
]
133259865 (DDX27)
Enzymes [BR:
bjv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133259865 (DDX27)
Spliceosome [BR:
bjv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
133259865 (DDX27)
Ribosome biogenesis [BR:
bjv03009
]
Eukaryotic type
Pre-60S particles
Helicases
133259865 (DDX27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cas3-like_C_2
Zip
UTP25_NTPase-like
Motif
Other DBs
NCBI-GeneID:
133259865
NCBI-ProteinID:
XP_061293896
LinkDB
All DBs
Position
13:77266559..77283779
Genome browser
AA seq
806 aa
AA seq
DB search
MLSELGFIRTIGEDEDVQVEPETDSEDEEEEGPIVLGRKQKALQKNRSADFNPDFVFTEK
EGMYDGSWAMADVLSQLKKKRAATTLDEKIEKVRKKRKTEDKEAKSGKSEKEKEAKEGSE
PEEEEDLERKDVEASEDEESETDYSSADENILTKADTLKIKERKKKKKKGQEAGGFFEDA
SQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAA
FALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKS
QEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRM
CSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDRE
AIVAVEAPHGGALTCFGGPRHSSHTAGEEQDVLGDGHWLTLVSLAALLMRTFTDHVMLFT
QTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIE
GVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKAAKAPVKARI
LPQDVILKFRDKIEKMEKDVYAVLQLEAEEKEMQKSEVQINTAQRLLEKGKEAPNPEPER
SWFQTKEERKKEKIAKALQEFDLALRGKKKRKKFMKEAKKKGEMTAEERSQFEILKAQMF
AERLAKRNRRAKRARAMPEEEPVRAPAKKQKQVKKSVFDEELTNTSKKALKQYRAGPSFE
ERKKLGLPHQRRGGNFKSKSRYKRRK
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgctctcggagctgggcttcatccggaccataggcgaagatgaggacgtgcaggtggag
ccggagactgactctgaggacgaggaggaggaggggcccattgtgctgggcagaaagcag
aaagccttacaaaagaaccgcagcgctgatttcaaccctgactttgttttcactgagaag
gagggaatgtacgatggcagctgggccatggctgatgtcctaagccagctgaagaagaag
agggctgccacaacattagatgagaagattgagaaagttcgaaagaaaaggaaaacagag
gataaagaagccaagtctggaaagtcagagaaggagaaagaagcaaaggagggctctgaa
ccagaggaggaggaagaccttgaaagaaaagatgtagaagcctcagaagatgaagaatca
gagactgactactcatcagctgatgagaacatcctcaccaaggcagatacactcaaaata
aaggagcggaagaagaaaaagaagaaaggacaggaagcaggaggattttttgaagatgca
tctcagtacgatgaaaacctctcattccaggacatgaacctttcccgccctctgctgaag
gccatcacagccatgggcttcaagcagcccacccccatccagaaggcgtgcatacctgtg
gggctgctggggaaggacatctgtgcctgcgcagccacggggacaggtaaaacggcagct
tttgccctgccggtcttggagcgcctgatctacaaaccccgccaggctccagtgacccgc
gtgctggtgctggttcccacccgagaactgggcatccaggtgcactccgtcaccaagcag
ctggcccagttctgcagcatcaccacctgcctggctgtgggtggcctggacgtgaagtct
caggaagcagcgcttcgggcagcgcctgacatcctcatcgccaccccaggccggctcatc
gatcacctccacaactgcccttccttccacctgagcagcatcgaggtgctcatcttggat
gaggctgacaggatgctggacgagtactttgaggagcagatgaaggagatcatccgcatg
tgctcccaccaccgccagaccatgcttttctcagccacgatgacggacgaggtgaaagat
ctggcctctgtctccttgaagaatcccgtccggatatttgtgaatagcaacacggatgtg
gcccccttcctgcggcaggagttcatccggatccggcctaaccgggaaggggaccgggaa
gccatcgtggcagtggaagctccacacggcggggccctcacttgttttggcggccccagg
cacagcagccacactgcgggcgaggagcaggacgtgcttggagatggccactggctcact
cttgtctccctggcagctctgttgatgagaaccttcactgaccatgtgatgctgttcacc
cagaccaagaagcaggcccaccgtatgcacatccttctggggctgatggggctgcaggtg
ggcgagctccatggcaacctgtctcagacgcagcggctggaggccctccggcgctttaaa
gacgaacagattgacatcctcgtggccaccgatgtagcagcccgtggactggacatcgag
ggggtcaaaacggtaatcaacttcaccatgcccaacaccattaagcattacgtccaccgg
gtgggacgcacagctcgtgctggccgggccgggcgctcggtctctctggtaggggaagag
gagcggaagatgctgaaggaaattgtcaaggccgccaaggcccctgtgaaggcccgcatt
ctgccccaggacgtcatcctcaaattccgggataagattgagaaaatggagaaagatgtg
tatgcagttctgcagttagaggctgaggagaaagagatgcagaagtcggaagtccagatc
aacacagcacagcggctcctggagaaagggaaggaggcaccaaaccctgagcctgagagg
agctggttccagaccaaggaagagaggaagaaggaaaaaattgccaaggctctgcaggag
tttgacttagccttaagaggaaagaagaaaaggaagaagtttatgaaggaagccaaaaaa
aagggggagatgacagcagaggagagatcccagtttgaaatcctcaaggcacagatgttt
gcggagcggctggccaagaggaaccgcagagccaagcgggcccgagcaatgcccgaggag
gagccagtgagggctcctgcaaagaagcagaagcaggtgaagaaatcagtatttgatgaa
gaactcaccaacacgagcaagaaggccctgaaacagtatcgagctggcccctcctttgaa
gaaagaaaaaaattgggcttgccccaccagagacgaggaggaaactttaaatctaaatcc
aggtacaaaaggaggaagtag
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integrated database retrieval system
