Bifidobacterium catenulatum PV20-2: AH68_01920
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Entry
AH68_01920 CDS
T03496
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bka
Bifidobacterium catenulatum PV20-2
Brite
KEGG Orthology (KO) [BR:
bka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bka03016
]
AH68_01920
Enzymes [BR:
bka01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AH68_01920
Transfer RNA biogenesis [BR:
bka03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AH68_01920
Prokaryotic type
AH68_01920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AIZ13998
UniProt:
A0A0A7I162
LinkDB
All DBs
Position
453275..454183
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AA seq
302 aa
AA seq
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MRLRIDLAYDGADFYGWAKQPDMRTVQGEIERVLHTILRVPEGDDNEPLRLTVAGRTDTG
VHASHQVCHLDINEETLARCVGHMQVEPVMALTRRLQRMLPNDIAIRSIKEAPEGFDARF
SALERTYVYRIADRSSEIDPRIRSCVLHIDDDLDIDAMNKAAEMTIGLHDFGSFATPNPG
GTTIREVKTAYWRRIPQHPLIDDGTTMGERYRTPALESGLLCFTIVADAFARNMVRSLVN
GCVQVGIGKRSLDWFAEKMATPLREGSTGPIAPQGLTLEHIEYPEDDQLAIRAETIRAKR
TL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
gtgagattacgtatcgacttggcatatgacggcgctgatttttacggatgggcgaaacag
cctgacatgcgcaccgtacagggggaaatcgaacgtgtgttgcataccattctgcgcgtg
ccggaaggcgacgacaatgagccgctgcgcctgactgtcgcaggtcgtaccgataccggc
gtgcacgcgtcgcaccaagtttgccatctcgatatcaatgaggagacgcttgcacgttgc
gtcgggcatatgcaggtcgaaccggtgatggcgttgacacgacgactgcaacgcatgctg
ccgaacgatatcgccattcgttccattaaagaggctcctgaaggatttgacgcacgtttc
tctgcgctggaacgcacttacgtatatcgcattgccgaccgatcaagcgaaatcgatcca
cgtatcagaagttgcgtgctgcatatcgacgatgatcttgacatcgacgccatgaacaag
gctgctgaaatgacgatcggtctgcatgatttcggctcgttcgcaactcccaatccagga
ggaaccaccatacgcgaggtcaaaaccgcatattggaggcgtataccgcagcatccgctt
atcgacgacggaaccaccatgggggagcggtaccgaacgcccgccttggaatcgggactg
ctctgcttcaccatcgtcgccgacgcattcgcgcgcaatatggtgcgttcattggttaac
ggttgcgtacaggttggtatcggcaaacgttccttggattggttcgccgaaaaaatggca
acgccgttgcgtgaaggcagcaccggtccgatcgctccgcaaggattgacgctcgaacat
atcgaatatccggaagacgaccagttggcgattcgtgccgaaacgatccgggcaaagcgc
acgctatga
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