Bifidobacterium catenulatum PV20-2: AH68_01965
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Entry
AH68_01965 CDS
T03496
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bka
Bifidobacterium catenulatum PV20-2
Brite
KEGG Orthology (KO) [BR:
bka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bka03016
]
AH68_01965
Enzymes [BR:
bka01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AH68_01965
Transfer RNA biogenesis [BR:
bka03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AH68_01965
Prokaryotic type
AH68_01965
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AIZ14005
UniProt:
A0A0A7I4F5
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All DBs
Position
463635..464702
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AA seq
355 aa
AA seq
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MTKKPEHSGLLIIDKPQGVTSHDVVAAVRGALHMKRVGHAGTLDPMATGVLVVGFGNATR
LLNYIVDHNKTYEATIRLGQRTTTDDAEGELLPAGERAVNFPSRQAVEQLIAERFTGRIE
QVPNVYSAIKINGQRAYDLAREGKDVELKARPVTIEEFNVRQARYGYTHSDRAGAELVGA
VVAEKASDGWIADIAPHEDMQPVMELDVTVTCSAGTYIRALARDLGEELGLGGHLTMLRR
TRVGRFSVDMPNVMSAHAESKTFTNREGMEVTRNRAVLDDADHALDHALNPVASAAASMS
MLAVSEQEAADLRFGRRIAHDIRTTTAAYVEETNDLVAILERAKRGEAKPVAVFN
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagaagcctgaacattccggtctgctgatcatcgacaagccgcagggcgtcacc
agccatgacgtagtcgcggccgtacgcggcgccctgcatatgaagcgagtcgggcatgcg
ggcacgctcgatccgatggccaccggcgtgctggtggtcggattcggcaatgccacgcga
ctgctcaactacattgtcgaccataacaaaacgtacgaggccaccattcgtcttgggcag
cgcaccactacggacgatgccgaaggcgagctgttgccggcaggggagagggcagtgaac
tttccttcgcgtcaagccgtggaacagctgatcgcagaacggttcaccgggcgtatcgaa
caggtaccgaacgtctactccgccattaagatcaatggccagcgtgcctatgatttggca
cgcgaaggcaaggatgtggagcttaaggcacgtcctgtgaccatcgaagagttcaacgtg
cggcaggcgcgttacggctacacacatagcgatcgtgccggtgcggaacttgttggcgca
gtcgtggccgagaaggcaagcgatggatggattgccgacattgcaccgcatgaagacatg
cagcccgtcatggaactcgacgtgaccgtgacctgttccgcaggcacctacattcgcgcg
ctcgcacgcgatttgggcgaggaactcgggttgggaggccatctgacaatgttgcgacgc
acacgcgtcggcagattctcagtggatatgcccaacgtcatgagcgcccacgctgaatcc
aaaacattcaccaatcgtgaaggcatggaagtgactcgcaatcgtgcggtgcttgacgat
gccgatcatgcgctcgatcatgcgctcaatcccgtggccagcgccgcagcttccatgagt
atgctggccgttagcgagcaggaagcggccgacttgcgtttcggacgcagaatcgcgcat
gacatacgtacgaccacggcggcgtacgttgaggaaaccaacgatttggtcgccatcctc
gaacgtgcgaaacgcggtgaggctaaaccggtcgcggtattcaactga
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