Bifidobacterium catenulatum PV20-2: AH68_02505
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Entry
AH68_02505 CDS
T03496
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bka
Bifidobacterium catenulatum PV20-2
Pathway
bka03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bka00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AH68_02505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bka03019
]
AH68_02505
03009 Ribosome biogenesis [BR:
bka03009
]
AH68_02505
Messenger RNA biogenesis [BR:
bka03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AH68_02505
Ribosome biogenesis [BR:
bka03009
]
Eukaryotic type
Pre-60S particles
RNases
AH68_02505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AIZ14096
UniProt:
A0A0A7I2H7
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All DBs
Position
578863..579513
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AA seq
216 aa
AA seq
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MVDAHDGETYTAKDSRLIWIDCEMTGLDIFHDELCEISVVPTDFDLNVLDEGIDFVIKPS
DAAVANMNDFVRAMHTRSGLINEWENGLSVEEAERKVTEYVARFTPDGVKPLLAGNSIGS
DKKFLDRYMPNLMEHLHYRVIDVSTFKELARRWYPAVYNNRPPKNGGHRALADIIESLDE
LRYYRKAFMAAAPGPDAAEAKAIADQIVATSILNNN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggttgacgcacatgacggtgaaacatacacggcgaaggattcacgcctgatctggatc
gactgcgaaatgactggtcttgacatcttccatgacgaactgtgcgagatttccgtagtg
ccgacggacttcgacctcaacgtgcttgacgaaggcatcgatttcgtgatcaagccttcc
gatgcggccgtggctaatatgaacgatttcgtgcgcgccatgcacacccgttccggactc
atcaacgaatgggagaacggcctgagcgtcgaagaggccgagcggaaagtcaccgaatac
gtggcccgcttcaccccggacggcgtcaagccgctgctcgcaggcaactccatcggatca
gacaaaaaattcctcgaccgttacatgccgaacctcatggaacacctgcactaccgtgta
atcgacgtgagcacgttcaaagagcttgcccgccgctggtatccggccgtatacaacaac
cgtccgccgaagaacggcggacatcgcgcgctcgccgacatcatcgaatccctggacgaa
ctgcgttactaccgtaaggcgttcatggcagcggcgcccggtcctgacgcagccgaagcc
aaggcgatcgccgatcagatcgtggcaaccagcattttaaacaacaactga
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