Bifidobacterium catenulatum PV20-2: AH68_06980
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Entry
AH68_06980 CDS
T03496
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bka
Bifidobacterium catenulatum PV20-2
Brite
KEGG Orthology (KO) [BR:
bka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bka03032
]
AH68_06980
03400 DNA repair and recombination proteins [BR:
bka03400
]
AH68_06980
Enzymes [BR:
bka01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AH68_06980
DNA replication proteins [BR:
bka03032
]
Prokaryotic type
DNA Topoisomerases
AH68_06980
DNA repair and recombination proteins [BR:
bka03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AH68_06980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
PDDEXK_1
LRIM1_dimer
Inp1
DUF4890
Motif
Other DBs
NCBI-ProteinID:
AIZ14821
UniProt:
A0A0A7I4B5
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All DBs
Position
1519583..1522270
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AA seq
895 aa
AA seq
DB search
MVSHRKPAKPAFDPRTVKENIVETPLNEEMSKSFLEYAYSVIYARALPDARDGLKPVQRR
IIYQMGQMNLNPDRPYMKSARVVGEVMGKLHPHGDSAIYEAMVRLAQPFAMRLPLVDGHG
NFGSLDDGPAASRYTEARMAQAALGMNANIAEDTVDFTPNYDNKLQEPTVLPAAIPNLLV
NGGSGIAVGMATNMATHNLGEVVAAAKHLMHHPDATLEELMRYVPGPDWPSGGVIVGRKG
IREAYETGRGALTTRSVTHIENVTARKKAIVVTELPFMVGPERVLERISEGVKNRKLEGI
SGAIDLTDRHNGTRLVIEIKTGFDPNAVLAQLFKHTPLQDNFTINNVALVNGRPHTMGLK
EMLQVWVDHRRAVIRRRSEFRKKKALERLHLVEGLLLAMVDIDEVIQVIRSSDDAEAAKT
KLIKVFDLDEIQAQYILDLRLRRLTKMSRIELEAERDDLKQRIEELDRILASSEALDGVV
IAEMDEAVATYGTPRRTVLLDEDADGRLVPVVAHGDDGVSASAVAAARAAATVSSAAADV
AAAAKAAKKAGEDNAEAMALQIDDEPCAVMLSATGLIARTSEDALERWENRSSADQRAKD
DQIISIFRTTTRSSYGLVTSAGRLIVAHVVELPVMSVDGPLHVTGGVRAEELIGMTENTD
PIRGERVIAAIAMPSADDSGDNTVEPTPLALGTRNGVVKRWNRESPTTMDSWSVIDLKDD
DEVLAAAEARDEDRLVFVSTDSSLLTFEAKNVRPQGRTAGGMAGIRLAEGCSVAAFAVVP
ASKVAWNYEEGENGLFSASGAVVLTVAGDSEALPGTENGSAKVTPLEMYPTKGRGTGGVR
SQRFLKGQDTLILAFVGTYPVHASTQGGAGVELPKPDMRRDGSGTELSAPIAIVG
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcgcaccgcaaaccggcaaaaccagcctttgacccgcgtacggtcaaagagaac
atcgtcgaaacaccgttgaacgaggagatgagcaagtccttcctcgaatacgcgtattcg
gtgatctatgcccgcgcgttgcccgacgccagagacggtctgaagccggtgcagcgccgc
atcatctaccagatgggtcaaatgaacctcaatccggatcgtccgtacatgaagtcggcc
cgtgtggtcggcgaggtgatgggtaagcttcacccgcatggcgattccgcgatttatgag
gcgatggttcgtcttgcgcaaccgtttgccatgcgtctgcctctggtcgacggccacggt
aatttcggatcccttgatgatggtccggcagcatcgcgttacaccgaggctcgcatggcc
caggctgcacttggcatgaacgcgaatatcgccgaagatacagtggatttcacaccgaac
tacgacaacaagctgcaggagccaaccgttttgcctgccgcgatcccgaatctgctcgtc
aatggcggttccggcatcgccgtcggtatggccacaaatatggcgacgcacaatctgggc
gaagtggttgccgcagccaaacacttgatgcatcatcctgatgccacgttggaagagctt
atgcgctatgttcccggccctgattggccgagcggtggcgtgattgtgggacgtaagggc
attcgcgaggcctacgagaccggtcgtggcgcgttgaccacgcgttcggtaacacatatt
gaaaacgtaaccgctcgtaagaaggcaattgtcgtaacggaactgcctttcatggtcggt
ccggaacgtgtgttggaacgtatttccgagggtgtgaagaatcgcaagctggagggtatt
tccggcgcgatagacctgacggaccgccataacggcactcgccttgtcattgaaatcaaa
accggcttcgacccgaacgccgtactggcgcaactgttcaagcacacaccgctgcaagac
aatttcaccattaataacgtagcattggtcaacggtcgcccacacaccatgggcttgaag
gaaatgcttcaggtatgggtggatcatcgccgtgcggtgattcgccgtcgtagcgaattc
cgcaaaaagaaggcgctggaacgtctgcacctggttgaaggccttctgcttgcgatggtc
gacattgacgaagtgattcaggtgattcgctcgtctgacgatgccgaagcagcaaagacg
aagctcatcaaggtgtttgatctggatgagattcaggcacagtacattctcgatttgcgt
ttgcgtcgcctgacgaaaatgagccgcatcgagcttgaagcggaacgcgacgatttgaag
caacgtattgaggagttagatcgcattcttgcctcctctgaggcgcttgacggcgtggtg
attgccgaaatggacgaagctgttgccacgtatggcacgccacgtcgcactgtgctgttg
gatgaagacgctgacggcaggcttgtgcctgttgtggcgcatggcgatgatggcgtatcc
gcctccgctgtggctgcggcacgcgccgcagccacggtgtcgtccgccgccgccgatgtc
gccgccgctgcaaaggccgcgaagaaagccggcgaagacaatgccgaagccatggctttg
cagatcgacgacgaaccgtgcgctgtgatgttgtcggccactggtctgatcgcacgcacc
tccgaagacgcgttggagcgttgggagaatcgctcttctgccgaccagcgtgcaaaggat
gatcagattatttcgatcttccgcacgaccacgcgttcctcatatggtttggtcacatct
gccggccgtctgattgtggcgcatgtcgtggaattgccggttatgtccgtggatgggccg
ctccacgtgactggcggcgtccgcgccgaagagttgatcggtatgacggaaaacaccgat
ccaattcgtggtgaacgtgtgatcgctgcgatcgccatgccatccgccgacgattccggt
gataataccgtagagcccactcctcttgcgttgggtacgcgcaatggtgtagtcaagcgt
tggaatcgcgaatcgcccaccaccatggattcatggagtgtcatcgatttgaaggatgat
gatgaagttctggctgccgctgaagcgcgtgacgaggatcggctggtgtttgtatccacc
gactcctctctgctgacgttcgaggcgaagaacgtacgtccgcagggacgcaccgccgga
ggcatggcaggcattcgcctggctgaaggctgctcagtggccgcgttcgcggtggttccc
gccagcaaggtggcatggaattatgaagaaggcgagaatggcctgttctccgcgtctgga
gctgtggtgttgacggttgcaggtgattccgaagcgttgccgggtacggagaatggttcc
gcgaaggtaaccccattggagatgtatccgacgaaaggccgcggtaccggtggtgttcgt
tcgcagcgcttcctcaagggacaggatacgttgattctcgcatttgtgggcacataccca
gtacacgcttccacacagggcggcgccggcgtggaattgccgaagccggatatgcgtcga
gatggttctggcacggagctttccgcaccaatcgccatcgtcggctaa
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