Bifidobacterium catenulatum PV20-2: AH68_07020
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Entry
AH68_07020 CDS
T03496
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
bka
Bifidobacterium catenulatum PV20-2
Brite
KEGG Orthology (KO) [BR:
bka00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AH68_07020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bka03021
]
AH68_07020
Transcription machinery [BR:
bka03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AH68_07020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
DprA_WH
HTH_20
CDC27
Motif
Other DBs
NCBI-ProteinID:
AIZ14828
UniProt:
A0A0A7I3G1
LinkDB
All DBs
Position
complement(1533337..1534716)
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AA seq
459 aa
AA seq
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MATKETTASMEQADLTEKTTSTKKAATRKASTKKSAAKKTPATKTPRKTTAKKSAPAKKE
EEQIENDALDDEDAQVDDPDLDDFDDDLDDVDSDDDDDLDDDEESEPEDDDDEDEEERKK
PEEPKEKGAFVVRDDDDDENLTPSGNPKRRVIAAGATADPVKDYLKQIGRVSLLNAEQEV
DLSERIEAGLYAQHLLDTESDQMDFKRKRELKWAANDGRRAKDHLLEANLRLVVSLAKRY
TGRGMLFLDLIQEGNLGLIRAVEKFDWKKGFKFSTYATWWIRQAITRAMADQARTIRVPV
HMVEVINKLSRVQRQMLQDLGREPTPDELARELDMPVEKVQEVQKYGREPISLHTPLGED
GDSEFGDLIEDTDAIAPSDAVAFSLLQEQFRQVLETLSPREAGVIKMRYGLEDGQPKTLD
DIGRVYGVTRERIRQIESKTMSKLRHPSRSQTLRDFLDQ
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
ttggccaccaaggaaacgacggcaagcatggaacaggctgatctgaccgaaaagaccacc
tccacgaagaaagctgccacgcgtaaggcctccaccaagaaaagcgcagcgaagaaaacc
cctgccacgaagacccctcgcaagaccaccgccaagaagagcgcccctgccaagaaggaa
gaggagcagattgagaatgacgcccttgacgatgaggacgctcaggtggatgaccccgat
ctcgatgatttcgatgacgatctcgatgacgtcgattcggatgatgatgacgatctcgat
gatgacgaggaatccgagccggaggatgacgacgacgaggacgaggaagaacgcaagaag
ccggaagagcccaaggaaaagggcgctttcgtggtgcgagacgatgacgatgatgagaat
ctgactccgtccggcaacccgaagcgtcgtgtgatcgcagcaggagcgaccgccgatcct
gtcaaggattacctgaagcagatcggtcgagtgagcttgctgaacgcggagcaggaagtc
gacctgtccgagcgtattgaggctggtctatatgcccaacacctgctggacaccgaatcc
gaccagatggacttcaagcgcaagcgcgagcttaagtgggccgcaaacgatggcagacgt
gccaaggaccacctgttggaggctaacctgcgactcgtggtgtcgctggccaagcgctac
accggacgcggcatgctgttcttggatttgattcaggaaggcaaccttggtttgattcgc
gctgttgagaagtttgattggaagaagggcttcaagttctccacctacgccacgtggtgg
attcgtcaggccattacccgagctatggccgatcaggcgcgcactattcgcgtgcctgtg
cacatggtcgaagtgatcaacaagctatctcgtgtgcagcgccagatgcttcaggatctt
ggccgtgaacctacgccggatgagcttgcgcgcgagcttgacatgccggtcgagaaggtg
caggaagtgcagaagtacggtcgtgagcccatttccctgcatacccctctgggcgaggac
ggcgattccgagttcggtgatctgatcgaagacaccgacgccatcgcaccgtccgatgcg
gttgctttctcgctgttgcaggaacagttcaggcaggtgcttgagacgctgtctccgcgc
gaggccggtgtgatcaagatgcgctatggcttggaagatggtcagccgaaaacgctcgat
gacattggccgcgtgtatggcgtaacccgtgaacgtattcgccagattgagtcgaagact
atgtcgaagctgcgtcacccgtctcgttcgcagacgttgcgtgacttccttgatcagtga
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