Bifidobacterium catenulatum PV20-2: AH68_07570
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Entry
AH68_07570 CDS
T03496
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bka
Bifidobacterium catenulatum PV20-2
Pathway
bka03030
DNA replication
bka03430
Mismatch repair
bka03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AH68_07570
03430 Mismatch repair
AH68_07570
03440 Homologous recombination
AH68_07570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bka03032
]
AH68_07570
03400 DNA repair and recombination proteins [BR:
bka03400
]
AH68_07570
Enzymes [BR:
bka01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AH68_07570
DNA replication proteins [BR:
bka03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AH68_07570
DNA repair and recombination proteins [BR:
bka03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AH68_07570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
tRNA_anti_2
DUF5487
Motif
Other DBs
NCBI-ProteinID:
AIZ14932
UniProt:
A0A0A7I3P0
LinkDB
All DBs
Position
complement(1664730..1668320)
Genome browser
AA seq
1196 aa
AA seq
DB search
MATSGNFVQLHNHTHYSLLDGASKIPDLVKRAKELNMPAVGITDHGNMHGAYEMWSTAVK
EGVKPIIGIEAYVTPETARQDQTRVSWDTNWNPDIDPQHRRRNPNDVSGGGLITHLTMWA
ETDEGLVNLMKASTDANLEGRVMRYPRMDKEILAKYSKGIIASSGCPSGIIQTRLLLGQF
DEALRAAGELQDIFGRDNFYIEFMDHGLKIEKQVTDGLLDIAKKLNAPLLATNDSHYVRA
EDAGSQDAMLCINSGSTLDEPGRFKFDGTGYYLKSAEEMRELFKDIPEACDNTLEIAERC
NVMFDDHEDGAFMPQFDCPEGWDETSLFLRKVEEGLEQRYDGHPPIEVLKQADYECGVIC
QMQFCGYFLVVADYINWAKSHGVMVGPGRGSAAGAMVAYAMGITELDPIKHGLIFERFLN
PERVSLPDIDVDFDPDGRGRVLDYVGDKYGRDKVAQCVIYGTIKTKQALKDSARIMGYEF
SMGERITKALPPAQTGGKDIPLRDIFEPTSKRYAEAREFRELYDSDPDAKRVTDEAMGIE
GLIRQTGVHACATIMGSEPISNTSPLLERTDGTVTTTLEYHTCETLGLVKMDFLGLSNLT
VIRDTLNNIEANGKERIDHTKIPLDDRATYDLLSRGDTLGVFQLDSDGMRSLLKTLKPNN
FNDISALIALYRPGPMDMDSHTNYAKRKNGLQKITPIHPEVAEPLKEVLDETYGLIVYQE
QVQSAARILAGYSLGKADVLRRAMGKKKPEVLAKEKVPFFAGMKEHGYSQEAAQAVWDIL
VPFSGYAFNKAHSAAYGLISYWTAYLKTHYPVEFMAALLQGASTNKDKTALYLGEARRMG
IQVLSPDVNESVYEYSAVGDVVRFGLGAIRNVGKAAVDAIVKERENDHGKYVNFPDFIKR
VPMEALNRRLVESLIKAGAFDSIDPNRRALFTIHEAAINSVVGLKRKQAEGQFDLFADLE
DSGEDDAGMGDAMVSVPDVEEWDKKTKLNFEREMLGLYVSDHPLSGMQSILVSLSEMSIA
HLIDRAANMPDGQQVTVAGLITNVDRRVSKKGNPWAIVTIEDLESSIQCMFFGKVYEAAA
PELAVDTVVQIRGQVEKRDETVSMRATEFNVPTLEAQDEKPVTIMLPPIALDQSHVQQLG
QILSNHPGPCEVKLALMDDKGNAKVLTFGDRFRVRRDTSLFAEIKILFGPSSLPLG
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atggctacttccggaaatttcgtacaactgcataatcacacgcattattcgctgcttgac
ggcgcatcgaaaattccggatctggtcaagcgcgccaaagaactcaatatgcccgcagtc
ggcatcaccgaccacggtaatatgcatggcgcgtacgaaatgtggagcaccgcggtcaaa
gagggcgtcaaaccaatcatcggcatcgaagcgtatgtgacgccggaaaccgcgcgacag
gatcaaacccgcgtcagctgggacaccaactggaatcccgatattgatccgcagcatcgc
cggcgcaaccccaacgacgtatccggcggtggcctgatcacccaccttacgatgtgggcc
gaaaccgacgaaggcctcgtcaatcttatgaaagcgtccaccgatgcgaatcttgagggc
cgtgtcatgcgatacccccgaatggataaggaaatccttgccaaatattccaaaggcatc
atcgcatcttccggatgcccgtcaggaatcatccaaacgcgactgctgctcggccagttc
gatgaagcattgcgtgccgcaggggaattgcaggatattttcggacgcgacaatttctat
atcgaattcatggatcacggtctgaagatcgaaaagcaagtgaccgatggtctgctggac
atcgcgaaaaagctgaacgcgccgctgcttgccaccaacgattcgcattacgtgcgtgcc
gaagacgctggctcgcaggatgccatgctatgcatcaactcgggttccacgctggacgag
ccgggacgattcaaattcgacggaaccggctactacctgaaatccgccgaagaaatgcgc
gaactattcaaagacattcccgaggcgtgtgacaacacgttggaaatcgccgaacgctgc
aacgtcatgttcgacgatcatgaggacggcgcgttcatgccgcaattcgactgcccggaa
ggctgggacgagacctcgctgttcctgcggaaagtcgaggaaggcttggaacagcgctat
gacgggcatccgccgatcgaagtgctcaagcaggccgattacgaatgcggtgtgatctgc
cagatgcagttctgcggttacttcctcgtggtggccgactacatcaattgggctaaatcg
catggcgttatggtggggccgggccgtggatcggcggcaggagccatggtggcgtacgcc
atgggcatcaccgaactcgacccaatcaaacatggcctgatcttcgaacgattccttaac
ccggaacgtgtgtcactacctgatatcgacgtcgatttcgatccggatggccgcggccgc
gtgcttgattacgtcggcgacaagtacggtcgagacaaggtcgcgcaatgtgtgatctac
ggcactatcaaaaccaagcaggcgctgaaggattcagcgcgaatcatgggctacgaattt
tccatgggcgagcgcatcaccaaggcgttgccgccggcgcagacaggtggcaaggatatt
ccgttgcgcgatattttcgagccgacgtcgaagcgttatgcggaggctcgtgaattccgt
gaattgtatgattccgatccggatgcgaagcgtgttacggatgaggcgatgggtattgag
ggtctgattcgtcagaccggcgtgcatgcgtgcgccacgatcatgggtagcgagccgatt
tcgaatacgtcgccgttgctggaacgtaccgatggtacggttacgaccacgttggaatat
catacgtgtgaaacgcttggtttggtcaagatggattttcttggtctttccaacttgacg
gttattcgcgatacgttgaacaatatcgaggcgaatggcaaggaacgtatcgaccatacg
aagattccgttggatgatcgtgccacgtacgatctgttgtcgcgaggtgacacgcttggc
gtgttccagttggattctgatggtatgcgttcgttgctgaaaacgttgaagccgaataac
ttcaacgatatttccgcattgatcgcgttgtatcgtcctggtccgatggatatggattcg
catacgaattatgcgaagcgtaagaatggtttgcagaagatcacgccgattcatcctgag
gtggctgagccgctgaaggaggtgcttgatgagacgtatggtctgattgtgtaccaggag
caggtgcagtcggctgcgcgtattttggctggttattcgttgggcaaggcagatgtgctt
cgtcgagcgatgggtaagaagaagcctgaggtactagccaaggagaaggtgccgttcttc
gcgggcatgaaggagcatgggtattcccaggaggcggcccaggccgtgtgggatattttg
gtgccgttctcaggctacgcgttcaataaggcgcattcggccgcatacggtttgatttcg
tattggaccgcgtatttgaagacgcattatccggtggagttcatggcggctttgctgcag
ggtgcgagtacgaacaaagacaagaccgcgttgtatttgggtgaggctcgccgcatgggc
attcaggtgttgtcgcctgatgtgaacgagtcggtgtacgagtattccgctgtcggcgat
gtggtgcgtttcggtcttggcgccattcgtaatgttggcaaggctgcggttgacgcgatt
gtcaaggaacgtgagaacgatcatggcaagtatgtgaatttccctgatttcatcaagcgt
gtgccgatggaagcgttgaatcgacgattggttgaatcgttgattaaggctggtgcgttt
gattcgattgatccgaaccgtcgtgcgttgtttacgattcatgaggctgcgatcaattcg
gtggtcggtttgaaacgtaagcaggctgagggccagtttgatttgttcgctgatttggag
gattccggcgaagatgatgccggcatgggtgatgccatggtgagcgtgcctgacgtggag
gagtgggataagaaaaccaagttgaatttcgagcgtgaaatgcttggtttgtatgtgtcc
gaccatccgttgagcggcatgcagtcgattctggtgtcgttgagtgaaatgtcgatcgcg
catctgatcgatcgtgccgcgaatatgcctgacggccagcaggtgacggtggctggcttg
attacgaatgtggatcgtcgcgtgtcgaagaagggcaatccttgggcgattgtgacgatt
gaggatttggaaagctctatccagtgcatgttcttcggcaaggtatatgaggccgccgct
cccgaactggcggtcgatacggtggtgcagattcgtggacaggtcgaaaaacgcgatgag
acggtgagcatgcgtgccacggaattcaacgtgccgacgttggaggcacaggatgagaag
ccggtgacgattatgctgccgccgatcgcgcttgaccaatcgcatgtgcagcagttgggg
cagattctctcaaatcatcctgggccttgcgaagtgaagctcgcgttgatggacgataag
ggcaacgccaaggtactgacgttcggcgaccgtttccgcgtgcgccgcgacacgagtctg
ttcgctgagatcaaaatccttttcggtcccagttctctgcctttgggctga
DBGET
integrated database retrieval system
