Bifidobacterium catenulatum PV20-2: AH68_07670
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Entry
AH68_07670 CDS
T03496
Name
(GenBank) DNA recombination protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
bka
Bifidobacterium catenulatum PV20-2
Pathway
bka03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AH68_07670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bka03400
]
AH68_07670
DNA repair and recombination proteins [BR:
bka03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AH68_07670
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AH68_07670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
AIZ14951
UniProt:
A0A0A7I4U2
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All DBs
Position
complement(1688889..1689617)
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AA seq
242 aa
AA seq
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MPLYQDEGVVLRTVKLGEADRIVTLLTRDHGKIRAVAKGVRRTKSRFGGRLEPFMRVSLL
IAEGRSLDVISQAESVSAYARDICADFKAYAAANVICETADKLVVTEHERSVAQYRLVLG
ALNALSKHAHEAAAIGDSYVMRALAIAGWTPRLRACVVCRDPISADRPWFFSISAGGLMC
STDHIRESFDVSWNAICQLQALVDGDWGELDGTALLPKTRQMVEKWGEYYLERPIRSMRL
LD
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgtatcaggacgagggcgtggtcttgcgcaccgtcaaacttggcgaagctgat
cgtattgtcactttgctgacacgcgaccatggcaaaatccgtgccgtcgccaaaggtgtg
cgtcgaaccaaatcgcgtttcggagggcgtttagagcctttcatgcgtgtctcgttgctt
attgcggaagggcgttcgcttgatgtgatttcccaagccgagtcggtctcggcgtatgcg
agagacatctgcgccgatttcaaggcgtatgccgcagcgaatgtgatttgcgaaaccgct
gacaagctggtagtgacggagcatgagcgttccgtggcacagtatcggctggtgttggga
gcattgaatgccctttccaagcatgcgcatgaggctgctgcgattggcgattcctacgtg
atgcgtgcccttgcgattgctggttggacgccgcgtttgcgtgcctgcgtggtgtgcagg
gatccgatttctgctgatcgtccatggttcttctcgatttccgcaggtggcctgatgtgt
tcgaccgatcatattcgtgaatcgtttgacgtttcgtggaatgcgatctgccagttgcaa
gcgcttgtagacggcgattggggagagctggacggcacggcgttgcttccgaaaacccgt
caaatggtggaaaaatggggtgaatactatttggaacgtccgattcgttccatgcgcttg
ctagattag
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