Bifidobacterium catenulatum PV20-2: AH68_08890
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Entry
AH68_08890 CDS
T03496
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bka
Bifidobacterium catenulatum PV20-2
Pathway
bka00300
Lysine biosynthesis
bka00470
D-Amino acid metabolism
bka01100
Metabolic pathways
bka01110
Biosynthesis of secondary metabolites
bka01120
Microbial metabolism in diverse environments
bka01230
Biosynthesis of amino acids
Module
bka_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bka00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AH68_08890
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AH68_08890
Enzymes [BR:
bka01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AH68_08890
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AIZ15126
UniProt:
A0A0A7I537
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Position
complement(2001350..2002930)
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AA seq
526 aa
AA seq
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MAVTPIWPAGSNVNEQGEITFHGRTAESLLNEFGSPLYVIDTDDVRARAAKFVKSAANAF
NNTVTHVSFAGKALLSKEICRIVTESGMLIDTCTMGEMRIALAAGVPGRRLVLHGNNKSD
AEIELAITEGFAKIVVDEPNEPARIAEIAKRLGKRARVMLRVTSGIHAGGHEFVSTAHED
QKFGVALLPVGADASKLNVLDDLADVTPAGSNARLGESEATPGESAERQLQYDIKYPYDM
SHEKVSEGDRKLAEAMTMVADGPALAVLKEIYRHQDVLELVGVHSHIGSNIHDADAFIQA
AKRMMLLRKTFYATDAYTLPEVDLGGGYSVAYTDGEDSMDLDTELARLADAVTTVNRALG
MPAPVISFEPGRWTVAPTGVTLYRVGTVKPVQLAGTAKDKAGNPVTERVYVSVDGGMSDN
IRPALYGSDYTAKIANREGSSETKLCRVVGMHCESGDIIVNEVRLPADIQRGDVLAVPVT
GAYGRTMASNYNQALIPAVVAVSEQDAHVMIRRQTIDDLLDWDVSE
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcacccccatctggccggccggctccaacgtgaacgagcaaggtgaaatcacg
ttccatggccgcactgccgaaagcctgctgaacgaatttggttcgccgctctacgtcatc
gacaccgatgacgtgcgcgcccgcgccgccaaattcgtcaaatctgcggcaaatgcgttc
aacaacaccgtaacccacgtcagtttcgccggaaaagcactgctttccaaggaaatctgc
cgtatcgtcaccgaatccggcatgctgattgacacctgcaccatgggcgagatgcgtatc
gcgcttgccgcgggcgttcccggaaggcggctcgtgctgcacggcaacaacaagtccgat
gcggaaatcgaactcgccattaccgaaggcttcgccaaaatcgtggtggacgagccgaac
gagccggcccgtatcgccgaaatcgccaagcgtctcggcaagcgcgctcgcgtgatgttg
cgtgttacgtccggcattcatgcgggcggccacgaattcgtgtctaccgcgcatgaggac
cagaagttcggtgtcgccttgctgccggttggtgccgatgcaagcaagctgaacgtgctc
gacgatttggctgacgtgacccccgcagggtcgaacgcacgcctaggcgaaagcgaagcc
actccgggcgaaagcgcagaacgccaactgcagtacgacatcaaatacccgtatgacatg
agccacgagaaggtttctgaaggcgaccgcaaactcgccgaagccatgaccatggtggct
gatggccccgcgctcgccgtattgaaggagatctaccgccatcaggatgtgctcgaactg
gtcggcgtgcattcgcatatcggatcgaacattcacgatgcggacgcctttatccaggcc
gcgaagcgcatgatgctgctgcgcaagaccttctacgccaccgacgcatacacactgccg
gaggttgacttgggcggcggctattccgtggcctacaccgatggcgaggattcgatggat
ctcgatacggaacttgcccgccttgccgatgcggtcaccaccgtgaaccgtgcgctcggc
atgcccgctccggtcatttcgttcgaaccgggccgttggacggtcgccccgaccggcgtc
accttgtatcgcgtgggtacggtcaagccggtgcagcttgccggaaccgcgaaagacaag
gctggcaatccggttacggaacgcgtgtacgtgtctgtcgacggcggtatgagcgacaat
attcgtccggcattgtatggatcggattacactgcgaaaatcgccaatcgtgagggttcc
agcgaaaccaagttgtgccgtgtggtcggcatgcactgcgaatcgggcgatatcatcgtc
aacgaggtgcgtcttcctgccgatattcagcgcggtgacgtgcttgcggtgcctgttacg
ggtgcatacggtcgcacgatggccagcaactacaatcaggcgctgattcctgcggttgtt
gccgtatccgagcaagatgcgcatgtgatgattcgccgtcagacgatcgatgatctgttg
gattgggatgtgagcgaatag
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