Bubalus kerabau (carabao): 129621006
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Entry
129621006 CDS
T11435
Symbol
NEO1
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
bke Bubalus kerabau (carabao)
Pathway
bke04350
TGF-beta signaling pathway
bke04360
Axon guidance
bke04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
129621006 (NEO1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129621006 (NEO1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
129621006 (NEO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bke04515
]
129621006 (NEO1)
Cell adhesion molecules [BR:
bke04515
]
Immunoglobulin superfamily
DCC/UNC5 family
129621006 (NEO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Interfer-bind
C2-set_2
Ig_5
fn3_2
Tissue_fac
fn3_SORL1
TMEM154
EphA2_TM
Ig_PDGFR_d4
TM_ErbB1
Herpes_UL74
FAM176
Motif
Other DBs
NCBI-GeneID:
129621006
NCBI-ProteinID:
XP_055392902
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All DBs
Position
10:24059913..24298334
Genome browser
AA seq
1464 aa
AA seq
DB search
MAAEPGAWRLLSTSFWLCCLLLLGRRAPGVAAARSGSPPQSSGSSIRTFTPFYFLVEPVD
TLSVRGSSVILNCSAYSEPSPKIEWKKDGTLLNLVSDDRRQLLPDGSLFISSVVHSKHNK
PDEGYYQCVATVESLGTIVSRTAKLTVAGLPRFASQPEPSSVYVGNSAVLNCEVNADLVP
FVRWEQNKQPLLLDDRVIKLPSGTLVISNATEGDGGLYRCMVESGGPPKYSEEAELKVLP
DPGATSNLVFLKQPSSLIRVLGQSAVLPCVASGLPTPAIRWMKNEETVDTESSGRLVLLA
GGSLEINDVTEDDAGTYFCIADNGNETIEAQAELTVQAQPEFLKQPTNIYAHESMDIVFE
CEVTGKPTPTVKWVKNGDMVIPSDYFKIVKEHNLQVLGLVKSDEGFYQCIAENDVGNAQA
GAQLIILEHDVAIPTLPPTSLTSATTDHLAPATAGPLPSAPRDVVASLVSTRFIKLTWRT
PASDPHGDNLTYSVFYTKEGMARERVENTSRPGEMQVTIQNLMPATVYIFRVMAQNKHGS
GESSAPLRVETQPEVQLPGPAPNIRAYATSPTSITVTWETPLSGNGEIQNYKLYYMEKGT
DKEQDVDVSSHSHTINGLKKYTEYSFRVVAYNKHGPGVSTQDVAVRTFSDVPSAAPQNLS
LEVRNSKSIVIHWQPPPPAAQNGQITGYKVRYRKASRKSDVTETLVSGTQLSQLIEGLDR
GTEYNFRVASLTVNGTGPATDWLSAETFESDLDETRVPEVPSSLHVRPLVTSIVVSWTPP
ENQNIVVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPL
YESAVTRPHTVPDPTPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKT
NIPANTKYKNANATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSP
PKDVTVVSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTH
QIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKADSSDKMANDQASGSAGKGSRLPD
LGSDYKPPMSGSNSPHGSPTSPLDSNMLLVIIVSVGVITIVVVVIIAVFCTRRTTSHQKK
KRAACKSVNGSHKYKGNSKDVKPPDLWIHHERLELKPIDKSPDPNPIMTDTPIPRNSQDI
TPVDNSMDSNIHQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDSQPPQPVISAHPIHS
LDNPHHHFHSSSLASPARSHLYHPGSPWPIGTSMSLSDRANSTESVRNTPSTDTMPASSS
QTCCTDHQDPEGATSSSYLASSQEEDSGQSLPTAHVRPSHPLKSFAVPAIPPTGPPTYDP
ALPSTPLLSQQALNHHIHAVKTASIGTLGRSRPPMPVVVPSAPEVQETTRMLEDSESSYE
PDELTKEMAHLEGLMKDLNAITTA
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagccgggagcctggcgactcctcagcacttccttctggctctgctgcctg
ctgctgctcgggcgccgggcgccaggcgtcgcggccgccaggagcggctccccgccgcag
tcctcaggatccagcattcggacattcactccattttattttttggtggaaccagtggat
acgctctcagttagaggctcttctgttatactaaactgttcagcatattctgagccatct
ccaaaaattgaatggaaaaaagatggcactcttttaaacctagtgtcagatgatcgacgc
cagcttctcccagatgggtctttgtttatcagcagtgtggtgcattccaagcacaataaa
cctgatgaaggttattatcagtgtgtagccactgttgagagtcttggaactattgtcagc
agaacagccaagctcacagtagcaggtcttccaagatttgccagccaaccagagccttct
tcagtttacgttgggaacagtgcggttctgaattgtgaagttaatgcagatttggtccca
tttgtgaggtgggaacagaacaaacagcctcttcttctggatgatagagttatcaaactt
ccaagcggaacactagttatcagcaatgcaactgaaggagatgggggactctatcgatgc
atggttgaaagtggtgggccaccaaagtatagtgaggaagctgaattaaaagttcttcca
gatcctggtgccacatcaaacttggtatttttgaaacaaccctcttccttaatcagagtc
cttggtcagagtgcagtgttgccatgtgttgcttcaggacttcctactccagccattaga
tggatgaaaaatgaggagacagttgacacagaaagctctggaaggttggtattgctggca
ggtggtagtctggagatcaatgatgtcaccgaggatgatgctgggacttatttttgtata
gctgataatggaaatgagaccattgaagctcaagcagagcttacagtacaagcccaacct
gaattcctgaagcagcctactaatatatatgctcatgaatctatggatattgtgtttgaa
tgtgaagtcactggaaagccaactccaactgtgaagtgggtcaagaatggggacatggtt
atcccaagtgactactttaagattgtaaaggaacataatcttcaagttttgggtctggtg
aaatcagatgaagggttctatcaatgcattgctgaaaatgatgttggaaatgcacaagct
ggagcccagctgataatccttgaacatgatgttgccatcccaacattacctcccacttca
ctgaccagtgccactactgaccatctagcaccagccacagctggaccactgccttcagcc
ccacgggatgtcgtggcctccctggtctctacccgcttcatcaaattgacatggcgaaca
cctgcatcagatcctcacggggacaaccttacctactctgtcttctacaccaaggagggg
atggctagggaacgtgttgagaataccagtcgcccaggagaaatgcaggtgaccattcaa
aacctaatgccagcaacagtgtacatctttagagttatggctcaaaataagcatggctct
ggagagagttccgctccactgcgggtagaaacacagcctgaggttcagcttcctggccca
gcacctaacatccgagcctatgcaacttcacctacttctatcactgtcacctgggaaaca
cccttgtctggaaatggggaaattcagaattacaaactgtactacatggaaaaggggact
gataaagaacaggatgttgatgtttcgagtcactcccacaccattaacggattgaaaaaa
tacacagagtatagtttccgagtggtggcctacaataaacatggtcctggagtctccaca
caggatgttgctgttcgaactttttcagatgttcccagtgctgctcctcagaatctgtct
ttagaagtaagaaattcaaagagtattgtgattcactggcagccacctcctccagccgca
caaaatggacagattactggctacaaggttcgctaccgaaaggcttcccggaagagtgat
gtcactgagaccttggtgtctgggacgcagctgtcacagctgatcgaaggtcttgatcgg
ggaactgaatataatttccgagtggcttctctaacagtcaatggtacaggtccagctact
gactggctgtcagctgaaacttttgaaagtgacttagatgaaactcgtgttccagaagtg
cctagttctcttcacgtccgcccactggtcactagcatcgtagtaagctggacgcctcca
gagaatcaaaacattgtggtcagaggttatgccattggttatggcattggcagccctcat
gcccagaccataaaagtagactataaacaacgctattacaccatcgaaaatctggatccc
agctctcactatgtgattaccctgaaagcatttaacaacgtaggtgaaggtatccccttg
tacgagagtgctgtgaccagaccccacacagtgccagatcccactcccatgatgccacca
gtgggagttcaggcttccattctgagccatgacaccataaggatcacctgggcggacaac
tccctgcccaaacaccagaagattacagactcccggtactacacagtccgatggaaaacc
aacatcccagcaaacaccaagtacaagaatgctaatgcaacgactttgagttatttggtg
actggtttaaaaccaaatacactctatgaattctctgtgatggtgaccaaaggtcgaaga
tcaagcacatggagcatgacagcccacgggactacttttgaattagttcctacttctccg
cccaaggatgtgacagttgtgagtaaagaggggaaaccgaggaccataattgtaaattgg
cagcctccctctgaagccaatggcaagattacaggttacatcatatattacagcacggat
gtgaatgcagagatacacgactgggttatcgagcctgttgtgggaaacaggctgactcac
cagatccaggaattaacacttgacacaccatactacttcaaaatccaagcccggaactca
aagggcatggggcccatgtctgaagctgtccagttcagaacacccaaagcggactcctct
gataaaatggctaatgatcaagcctcggggtctgcagggaaaggaagccgactgccagac
ctgggatccgactacaaacctccaatgagcggcagtaacagccctcatggaagccccacc
tctcctctggacagtaacatgctgctggtcatcatcgtttccgtcggcgtcatcaccatc
gtggtggtcgtgatcatcgctgttttctgcacccggcggactacctctcaccagaaaaag
aaacgagctgcttgcaaatcagtgaatggctcccacaagtataaagggaactccaaagat
gtcaaacccccagacctctggatccatcacgagagactggagctcaaacccattgataag
tctccagacccaaaccccatcatgactgatacaccaattcctcgtaattctcaagatatc
acaccagttgacaattccatggacagcaacatccatcaaaggcggaattcatatagaggg
catgaatcagaggacagcatgtctacactggcaggaaggcggggaatgagaccaaaaatg
atgatgccctttgactcccagccaccccagcctgtgattagtgcccatcccatccattcc
ctcgataaccctcaccatcatttccactccagcagcctcgcttctccagctcgcagtcat
ctctaccacccgggcagcccatggcccattggcacatccatgtccctttcagacagggcc
aattccacagaatctgttcgaaacacccccagcactgacaccatgccagcctcctcgtct
caaacatgctgtaccgatcatcaggatcctgaaggtgctaccagctcttcttacttggcc
agctcccaagaggaagattcgggccagagtctccctacagcccacgttcgcccttcccac
ccactgaagagctttgctgtgccggcaatcccacccactgggcctcccacctatgaccca
gcgttgccaagcacaccgttactctcccagcaagctctgaaccatcacatccacgccgtg
aagacagcctccatcgggactttaggaaggagccggcctcctatgccagtggtggttccc
agtgcccctgaagtgcaggagaccacaaggatgctggaggactccgagagtagctatgaa
ccagatgagctgaccaaagagatggcccacctggaaggactgatgaaggacctaaacgcc
atcacgacagcatga
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