Bubalus kerabau (carabao): 129621066
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Entry
129621066 CDS
T11435
Symbol
ACIN1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
bke Bubalus kerabau (carabao)
Pathway
bke03013
Nucleocytoplasmic transport
bke03015
mRNA surveillance pathway
bke03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129621066 (ACIN1)
09122 Translation
03013 Nucleocytoplasmic transport
129621066 (ACIN1)
03015 mRNA surveillance pathway
129621066 (ACIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bke03019
]
129621066 (ACIN1)
03041 Spliceosome [BR:
bke03041
]
129621066 (ACIN1)
Messenger RNA biogenesis [BR:
bke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129621066 (ACIN1)
Spliceosome [BR:
bke03041
]
Complex C
Other components
EJC/TREX
129621066 (ACIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
129621066
NCBI-ProteinID:
XP_055393027
LinkDB
All DBs
Position
10:25928165..25966826
Genome browser
AA seq
1335 aa
AA seq
DB search
MCRRKHPSTSGGTRGALSGNRGVDYGSGRGQLGTFEGRWRKLPKMPEAVGTDPSTSRKMA
ELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKGALMLENLQKHSTPHAA
FQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEEASAESEDEMIHPERVA
SLLPPDFQSSLERPELELSRHSPRKSTSISEEKGESDDEKPRKGERRSSRVRQARAAKLS
ECSQAAEEEEDQETPSRNLRVRADRNLKTEEEEEEEEEEEEEEEEEEDDDEGQKSRDAPV
LKQFKEEGEEIPIVKVEEVTDERPQTIRSQEQEGLERGGRVTRSQEEARRSHLARHQQEK
EMKTASLEEEERERKSSKGLEEKSKSPSPPQLTEDVAKAPVVLQPELTASEEETPPPLLT
KEASSPPPNTQLQSEEEIEPMEGPAPPVLIQLSPPNADGEARELLLSQHTVQLVGSLSPL
SGRADTKVESPVEKVPEESVLPLVQKSAQAESSAQKGLETESEKSTQPLPLKIEEFTLAK
GITEESLEQKEGRRASHALLPSHRLKQSADSSSSRSSSSSSSSSRSRSRSPDSSGSQSHS
PPRSKQRDGSGARAHANPHDRSKVGSRSTSESRSRSRSRSRSASSNSRKSLSPGVSRASS
TSYTETKDPSSGQEVAAPPLPQLQVLEPKERTSTPSSIQVRLVSQPEPAAKHVTQRLQPD
RGSPKKCEAEEAEPPAATQPQTSETPTSHLPESERIHHAVEEKEEVTMDTSENRPENEVP
EPPMPIADQVSNDDRPEGNAEDEEKKESLLPKSFKRKISVVSATKGVPAGNSDTEGGQPS
RKRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAVVDLHADDSRISEDETERNG
DDGTHDKGLKICRTVTQVVPAEGQENGQREEEEEEKEPEAEAPVPPQVSVEVALPPPVEH
EVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKISNIVHISNLVRPFTLG
QLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHGVKWPQSNPKFLCADY
AEQDELDYHRGLLVDRPSETKTEEQGMPRPLHPPPPPPAQPPQHPRAEQREQERAVREQW
AEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKEKAQEEP
PAKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKEREKRRKEQEEEEQKEREKE
AERERTRQLEREKRREHSRERDRERERDRERDRGDRDRERDRERERGRERDRRDTKRHSR
SRSRSTPVRDRGGRR
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagacggaaacacccgagcacttccggaggaacccggggagcgctgagtggtaat
cgaggggttgactatggcagtgggcggggccaactcggtacgttcgaagggcgttggcgg
aaattaccgaagatgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcg
gagctggaggaggtgactctggacgggaagcctcttcaggcgctgcgggtgaccgacctg
aaggccgcattggagcagcgaggcctagccaagagcgggcagaagagtgccctggtcaag
cggctcaaaggggctctaatgctagaaaatttacaaaaacactcaaccccgcatgctgca
ttccagccaaattcccagattggcgaggaaatgagccagaacagtttcattaagcagtat
ctggaaaagcagcaggagctgcttaggcagcgtttggaacgtgaagctcgagaagctgca
gaacttgaagaagcttcagctgagtcggaggacgagatgatccatcccgagagagtggct
tccctgctgcctcctgactttcagagcagcctggagagaccagagctggagctcagcaga
cattcacccagaaaaagcacctctatttctgaagagaaaggtgaatctgatgatgagaaa
ccaaggaaaggagaaagacgatcatccagagtcagacaggcaagagcagctaaactctcc
gagtgtagccaggctgcagaggaggaagaggatcaagaaacaccttctagaaatctgagg
gtcagagcagatcgaaatttgaaaacagaggaggaagaagaagaggaggaggaagaggaa
gaagaggaggaagaggaggaagatgatgatgagggacaaaaatctagagatgcaccagtc
ctgaaacaatttaaggaagagggagaagagatacccatagtaaaagtggaggaggtgaca
gatgagagaccccaaactataagatcccaggaacaggaagggttagagagaggagggaga
gttacaaggtcccaggaagaggcccgaagaagtcatctagccagacatcagcaggagaaa
gagatgaaaacagcttctcttgaagaagaagaaagagaaagaaaatcttcaaaaggcttg
gaggaaaaatccaagtctccttcccctcctcaattgactgaagatgtggcgaaggccccg
gttgtgctacaaccagaactaactgccagtgaggaggagactcccccacctttacttacc
aaggaagcatcttctccaccacctaatacacagctccagagtgaagaagaaatagagccc
atggaaggcccggcccctcctgtccttattcagttatctcctcctaatgcagatggtgag
gccagggagctattactatctcagcatactgtgcagttggtgggaagtttgtctcctttg
tcaggtcgtgcagacaccaaagttgaatctccagtagagaaagtgccagaggagagtgtc
ctgcctctagttcagaaaagcgcacaagctgaatcctcagcccagaaaggtcttgaaact
gaatcagaaaaatccactcaaccactccctctaaaaattgaggaattcacactggccaaa
gggatcactgaggaatctttggaacagaaagaaggcaggagggcttctcatgcccttctt
ccaagccacagattgaaacagtcagctgactcctcctctagccgatcctcctcatcttca
tcctccagttctaggtcaagatctcgctctcctgacagttcaggctctcagtctcactca
cctccaagatccaagcagagagatgggtctggggcacgtgctcatgccaaccctcatgat
aggtccaaggtgggctccagatcaacatcagagtccaggtcacgttcccgttctcgttcc
cggtcagcatcaagcaacagcagaaaatctttgagccctggagtctctagggccagcagc
accagctacactgaaaccaaagacccctcttctggtcaggaggttgcagctccaccattg
ccacaactgcaggtccttgagccaaaggagaggacttccaccccatcctctatccaagtg
aggcttgtgagccaacctgagccagctgcaaagcatgtgacccagaggttacagcctgat
cgggggagcccaaagaagtgtgaagctgaagaggcagagccaccggctgccacacagccc
caaacctcagagactccgacctctcacctaccagaatcagaaaggattcatcacgctgtt
gaggagaaggaggaagtgaccatggacacaagtgaaaacagacctgaaaatgaggttcca
gagccccccatgcctattgcagaccaagtcagcaatgatgatcgcccagagggcaatgct
gaggatgaggagaagaaagagagcttgctgcccaaatcattcaagaggaagatctccgtt
gtctcagctaccaagggggtgccggctggaaacagtgacacagaggggggccagcctagt
cggaagcggcgctggggagccagcacagccaccacccagaagaaaccctccatcagtatc
accaccgagtcactcaagagcctcatccccgacatcaaacccctggcggggcaggaggct
gttgtggatcttcatgctgacgactcccgaatctctgaggatgagacagagcgtaatggt
gatgatgggacccatgacaaggggctgaaaatatgccggactgtcactcaggtggtacct
gccgagggccaggagaatgggcagagggaagaggaggaagaagagaaggagcctgaagca
gaagcccctgtgcctccccaggtctcagtagaggtggccttgcccccccctgtggaacat
gaagtcaagaaagtgactttaggagataccttaactcgacgttccattagccagcagaag
tcaggagtttccattacgattgatgatccagtccggactgctcaggtgccctccccaccc
cggggcaagatcagtaacatcgtccacatctccaatttggttcgtcccttcactttaggc
caactgaaggagttgttgggacgtacaggaactctggtagaagaggctttttggattgac
aagatcaaatctcactgctttgtaacgtactcaacagtagaggaagcagttgccacccgc
acagctctccatggggtcaaatggccccagtccaaccccaaattcctttgtgctgactat
gctgagcaagatgagctggactatcaccgaggcctcttggtggaccgtccctctgaaact
aagacagaggagcaggggatgccacggccactgcaccccccacccccacccccagcccag
ccaccacagcaccccagagcagagcagcgggagcaggagcgggcggtacgggagcagtgg
gcagaacgggaacgggaaatggagcggcgggagcggactcgatccgagcgcgaatgggat
cgggacaaagttcgagaagggccccgttcccgatcccggtcccgtgatcgccgccggaag
gaacgcgcaaagtctaaagaaaagaagagtgagaagaaagagaaagctcaggaggaacca
cctgccaagctgctggacgaccttttccgcaagaccaaggcagctccctgcatctattgg
ctcccactgactgacagccagattgttcagaaggaggcagagcgggctgaacgggccaag
gagcgggagaagcggcgaaaggagcaagaagaagaagagcagaaggagagggagaaggag
gcagagcgggaacggacccggcagctggagcgagagaagcggcgagaacacagccgagag
agggacagggagagagagagggaccgggagcgggacaggggggatcgagatcgggagcgg
gacagggagcgggaacgaggcagggagagggaccgcagagacaccaagcgccacagcagg
agccggagcaggagcacacctgtgcgggaccggggcgggcgccgctag
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