Bubalus kerabau (carabao): 129621372
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Entry
129621372 CDS
T11435
Symbol
RORA
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
bke Bubalus kerabau (carabao)
Pathway
bke04659
Th17 cell differentiation
bke04710
Circadian rhythm
bke05017
Spinocerebellar ataxia
bke05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
129621372 (RORA)
09159 Environmental adaptation
04710 Circadian rhythm
129621372 (RORA)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
129621372 (RORA)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
129621372 (RORA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bke03000
]
129621372 (RORA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
bke03310
]
129621372 (RORA)
Transcription factors [BR:
bke03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
129621372 (RORA)
Nuclear receptors [BR:
bke03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
129621372 (RORA)
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GFIT
Other DBs
NCBI-GeneID:
129621372
NCBI-ProteinID:
XP_055393733
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Position
10:53836057..54652577
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AA seq
600 aa
AA seq
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MESAPAAPDPAASEPGSSGSDAAAGSRETPLNQESARKSEPPAPVRRQSYSSTSRGLSMP
VSSEGTERRRHDPGISVTKKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQ
SNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQK
HRMQQQQRDHQQQPGEAEPLTPTYNISANGLTELHDDLSNYIDGHTPEGSKADSAVSSFY
LDIQPSPDQSGLDINGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISK
SHLETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRID
GFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISF
VFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHR
EDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQID
GYGPFFCLDFLIVDLCLQQKAGTKVGRCPFLVAHCPQTFYRVTHLSVTTEGPALIGDWCA
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagctccggcagcccccgaccccgccgccagcgagccgggcagcagcggctcg
gacgcggccgccggctccagggagaccccgctgaaccaggaatccgcccgcaagagcgag
ccgcccgccccggtgcgcagacagagctattccagcaccagcagagggttatccatgcca
gtgtccagtgagggaactgagagaaggcggcatgatccaggtatctcagtaacaaagaag
acacatacatctcaaattgaaattattccatgcaagatctgtggagacaaatcatcagga
atccattacggtgtcattacatgtgaaggctgcaagggctttttcaggagaagtcagcaa
agcaatgccacctactcctgtcctcgtcaaaagaactgtttgattgatcgaaccagtaga
aaccgctgccagcactgtcgattacagaaatgccttgccgtggggatgtctcgagatgct
gtaaaatttggccgcatgtcgaaaaagcagagagacagcttgtacgcagaagtacagaag
caccggatgcagcagcagcagcgagaccaccaacagcagcctggagaggccgagccgctg
actcccacctataacatctcggccaacgggctcacggagcttcacgatgacctcagcaac
tacatcgacgggcacacccccgagggcagcaaggcagactctgccgtcagcagcttctac
ctggacatacagccttccccggaccagtcaggtcttgatatcaatggaatcaaaccagaa
cccatatgtgactacacaccagcatcaggcttcttcccctactgctctttcaccaatgga
gagacttccccaactgtgtccatggcagaactagaacaccttgcacagaatatatctaaa
tcacatctggaaacttgccaatacttgagagaagagctccagcagataacgtggcagacc
tttctgcaggaggagattgagaattatcaaaacaagcagcgggaggtgatgtggcaattg
tgtgccatcaaaattacagaagctatacagtacgtggtggagtttgccaaacgcattgat
ggatttatggaactatgtcaaaacgatcaaattgtgcttctcaaagcaggttctctagag
gtggtatttatcagaatgtgccgtgcctttgactctcagaacaataccgtgtacttcgat
gggaaatatgctagccccgatgtcttcaaatccttaggttgtgaagactttattagcttt
gtatttgaatttggaaagagtttatgttctatgcacctgactgaagatgaaattgcatta
ttttctgcatttgtcctgatgtcagcagatcgctcatggctgcaggaaaaggtaaaaatt
gaaaagctgcaacagaaaattcagctagctcttcaacatgtcctacagaagaatcaccga
gaagatggaatactaacaaagttaatatgcaaggtgtctacattaagagccttatgtgga
cggcatacagaaaagctcatggcgtttaaagcaatatacccagacattgtgcgacttcat
tttcctccattatacaaggagttgttcacttcagaatttgagccagccatgcagattgat
ggatatggaccctttttctgtctcgacttcttgatcgttgacctctgtttacaacagaag
gcgggtactaaagttggaagatgtccttttcttgtagctcactgcccacagactttctac
agagtcacccatctgtcggtaaccacagagggtccagcactaatcggtgactggtgtgca
tag
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