Bubalus kerabau (carabao): 129621633
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Entry
129621633 CDS
T11435
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
bke Bubalus kerabau (carabao)
Pathway
bke04066
HIF-1 signaling pathway
bke04137
Mitophagy - animal
bke04140
Autophagy - animal
bke04148
Efferocytosis
bke04659
Th17 cell differentiation
bke04919
Thyroid hormone signaling pathway
bke05167
Kaposi sarcoma-associated herpesvirus infection
bke05200
Pathways in cancer
bke05205
Proteoglycans in cancer
bke05208
Chemical carcinogenesis - reactive oxygen species
bke05211
Renal cell carcinoma
bke05230
Central carbon metabolism in cancer
bke05231
Choline metabolism in cancer
bke05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
129621633 (HIF1A)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129621633 (HIF1A)
04137 Mitophagy - animal
129621633 (HIF1A)
04148 Efferocytosis
129621633 (HIF1A)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
129621633 (HIF1A)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
129621633 (HIF1A)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
129621633 (HIF1A)
05205 Proteoglycans in cancer
129621633 (HIF1A)
05208 Chemical carcinogenesis - reactive oxygen species
129621633 (HIF1A)
05230 Central carbon metabolism in cancer
129621633 (HIF1A)
05231 Choline metabolism in cancer
129621633 (HIF1A)
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
129621633 (HIF1A)
09162 Cancer: specific types
05211 Renal cell carcinoma
129621633 (HIF1A)
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
129621633 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bke03000
]
129621633 (HIF1A)
Transcription factors [BR:
bke03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
129621633 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
DDRGK
Motif
Other DBs
NCBI-GeneID:
129621633
NCBI-ProteinID:
XP_055394237
LinkDB
All DBs
Position
10:78784532..78831540
Genome browser
AA seq
823 aa
AA seq
DB search
MEGAGGANDKKKISSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASVM
RLTISYLRVRKLLDAGDLDIEDEMKAQMNCFYLKALDGFVMVLTDDGDMIYISDNVNKYM
GLTQFELTGHSVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGR
TMNIKSATWKVLHCTGHIHVYDTNSNQSQCGYKKPPMTCLVLICEPIPHPSNIEIPLDSK
TFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQV
TTGQYRMLAKRGGYVWIETQATVIYNTKNSQPQCIVCVNYVVSGIIQHDLIFSLQQTECV
LKPVESSDMKMTQLFTKVESEDTSSLFDKLKKEPDALTLLAPAAGDTIISLDFGSNDTET
DDQQLEEVPLYNDVMLPSSNEKLQNINLAMSPLPASETPKPLRSSADPALNQEVALKLEP
NPESLELSFTMPQIQDQPASPSDGSTRQSSPEPNSPSEYCFDVDSDMVNEFKLELVEKLF
AEDTEAKNPFSTQDTDLDLEMLAPYIPMDDDFQLRSFDQLSPLENSSTSPQSASTNTVFQ
PTQMQEPPIATVTTTATSDELKTVTKDGMEDIKILIAFPSPPHVPKEPPCATTSPYSDTG
SRTASPNRAGKGVIEQTEKSHPRSPNVLSVALSQRTTAPEEELNPKILALQNAQRKRKIE
HDGSLFQAVGIGTLLQQPDDRATTTSLSWKRVKGCKSSEQNGMEQKTIILIPSDLACRLL
GQSMDESGLPQLTSYDCEVNAPIQGSRNLLQGEELLRALDQVN
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgccgggggcgcgaacgacaagaaaaagataagttctgaacgtcgaaaagag
aagtctagagatgcagccagatctcgtcgaagtaaagagtctgaagttttttatgagctt
gctcatcagttgccactcccccataatgtaagctcgcatcttgataaggcttctgttatg
aggctcaccatcagctatttgcgtgtgaggaaacttctggatgctggtgatttggatatt
gaagatgaaatgaaggcacagatgaattgcttttatttgaaagccttggatggttttgtt
atggttctcacagatgatggtgacatgatttacatttctgataatgtgaacaaatacatg
ggattaactcagtttgaactaactggacacagtgtgtttgattttactcatccatgtgac
catgaggaaatgagagaaatgcttacacacagaaatggccttgtgaaaaagggtaaagag
caaaatacacagcggagcttttttctcagaatgaagtgtaccctaactagccgggggaga
actatgaacataaaatctgcaacatggaaagtacttcactgcacaggccatattcatgta
tacgataccaacagtaaccaatctcagtgtgggtataagaaaccaccgatgacatgcttg
gtgctgatttgtgaacccattcctcatccatcaaatattgaaattcctttagacagcaag
acttttctcagtcgtcacagtctggatatgaaattttcttattgtgatgaaagaattaca
gaattgatgggatatgagccagaagaacttttgggccgctcaatttatgaatattatcat
gccttggactctgaccatctgaccaaaactcatcatgatatgtttactaaaggacaagtc
acaacagggcagtacagaatgcttgccaaaagaggtggatatgtctggatagaaactcaa
gcaactgtcatatataacactaagaactctcagccccagtgcattgtatgtgtcaattat
gttgtgagtggtattattcagcacgacttgattttctcccttcaacaaacagaatgtgtt
ctcaaaccagttgaatcttcagacatgaaaatgactcagctattcaccaaagttgaatca
gaagatacaagcagtctctttgataaacttaagaaggagcctgatgctttaactttgctg
gccccagctgctggagacacaatcatatctttagattttggcagcaatgacacagagact
gatgaccaacaacttgaggaagttccattgtataacgatgtaatgctcccctcatctaat
gagaaactgcagaatataaatttggcaatgtctccattacctgcctctgaaactccaaag
ccacttagaagtagtgctgaccctgcactcaaccaagaagttgcattaaagttagaacca
aatccagagtcactggaactttcttttaccatgccccagattcaagatcagccagctagt
ccttctgatggaagcaccagacaaagttcacctgagcctaacagtcccagtgaatattgt
tttgatgtggatagtgatatggtcaatgaattcaagttggaattggtagagaaacttttt
gctgaagatacagaagcaaagaatccattttccactcaggacactgatttagacttggag
atgttagctccttatatcccaatggatgatgacttccagttacgttccttcgatcagttg
tcaccactggaaaacagttctacaagtcctcagagtgcaagcacaaatacagtattccag
cccactcaaatgcaagaacctcccatagccaccgtcactaccacagccaccagtgatgaa
ttgaaaacagtgacaaaagatggtatggaagacattaaaatactgattgcatttccatct
cctccccacgtacctaaagaacctccttgtgccacaacgtcaccatatagtgatactgga
agtcggacagcctcacccaacagagcaggaaaaggagtcatagaacagacagaaaaatct
catccaagaagccctaatgtgttatctgtcgctttgagtcaaagaactactgctcctgag
gaagaactaaatccaaagatactagctttgcagaatgctcagagaaagcgaaaaattgaa
catgatggttcactttttcaagcagtaggaattggaacattattacagcaaccagatgat
cgtgcaactaccacatcactttcttggaaacgtgtaaaaggatgcaaatctagtgaacaa
aatggaatggagcaaaagacaattattttaataccctctgatttagcatgtagactgctg
gggcaatcaatggatgagagtggactaccacagctgaccagttatgattgtgaagttaat
gctcctatacaaggcagcagaaacctactgcagggtgaagaattactcagagctttggat
caagttaactga
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