Bubalus kerabau (carabao): 129621737
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Entry
129621737 CDS
T11435
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
bke Bubalus kerabau (carabao)
Pathway
bke03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
129621737 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bke03036
]
129621737 (ERCC6)
03400 DNA repair and recombination proteins [BR:
bke03400
]
129621737 (ERCC6)
Chromosome and associated proteins [BR:
bke03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
129621737 (ERCC6)
DNA repair and recombination proteins [BR:
bke03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
129621737 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
129621737
NCBI-ProteinID:
XP_055394456
LinkDB
All DBs
Position
1:complement(166762884..166834748)
Genome browser
AA seq
1544 aa
AA seq
DB search
MRPRPRPTHGCGSLLGAVLTAARDVEDARAAPGPSPSSTAADCGCCVYVSVRVAARPWDS
LKRMPNERIPYSSQTQEPDCSRSQDVSGSEEGTIKQEKDGDMDLGQSLPSCSSANGPSTS
TEGCLLELPRRGPALLHIDRHQIQAVEPSAQALELQGLGVDVYDQDVLEQGVLQQVDSAI
HEANCVAQLAEAEKEYRSVLDDLTSCTTSLRQIDKIIEQLGPQAATNKDINRKLDSVKRQ
KYNKEQQLKKITAKQKRLQAILGGAEVKVELGHGSLEEEDAEAAPSCLGSMLMPAQETAW
EELVRTGQMTPFGTKIPQKQEKKPRKLMLNEASGFEKYLADQAKLSFERKKQACNKRTAK
KASASATSELSSALNENKPGERGKVVSKTDKRLKKQIKKLQKRALQLQGQVGLLKGKKPW
DCDVRPKAQGDSEGEESEYLPTEDELEETVGADLPGEGADCEQRLALNCRKRQKKVTVQE
VDDDFFPSSGEEAEATGGGRKVVRCRDDGDEDYYKQRLRRWNKRRLKNKEKSLRLEDDSE
ESDAEFDEGFKMPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA
GLSYSKIRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAVLHETGSFTHKK
EKLVRDIAHCHGILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRT
PHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTA
YKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYR
ILNGEMQIFSGLVALRKICNHPDLFSGGPKNLKGIPDEELEEDQFGYWKRSGKMIVVESL
LKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLITRYNEDTSI
FVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGT
IEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLSSPDTSQSTETSAIFAGTGS
DVQTPKRHLKRRLQQACGTDQNVPVDKQFPDCKTSANAAMSSEEVSAALVNDVNAVTSDQ
GIPLNDAVQTPHSLTSSERLGEEADTVSRPRESSVIHENGDSSDSPRISRTCGMSGEESI
NEKESLSDKRESCQVQREALWENEQMENNFYKHKSKMKHHVAEEPMEKHLRPNQKPKSSK
HRRDAKFEGTRIPHLVKKRQYRRRDPETESEAKERSHDDYVLEKLFRKSVGVHSVMKHDA
IMDGASPDHVLVEAEANRVAQDALRALRLSRQQCLGAASGVPTWTGHRGLAGAPAGKKSR
FGQKRNSSFSVQRPSSTSPKEKCQDSTVKKEGKDHVSEHFSGKAEDTESSSGALTSSSLL
AKMRARNHLILPERLESESGRLPEATAPLPCSTEHDDLLVEMRNFIAFQAQADGQASTRE
ILQEFESKLSASQSCVFRELLRSLCTFHRTSAGEGIWKLKPEYC
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccgaggccccgccccacgcacggctgcgggtcactgttgggggcggtgcttacg
gcggcacgagacgtagaagacgcacgcgccgcgcccggtcctagtccaagttctacggcg
gctgactgcggctgctgcgtgtacgtttccgtacgggtggccgcgcggccctgggatagt
ctgaagaggatgccaaatgaaagaatcccctactcaagtcaaactcaggagccagactgt
tcacggagccaggatgtcagtggcagtgaagaggggacaattaagcaggagaaggatggc
gacatggatctggggcagagcctcccctcttgttcctctgctaatggaccctccacttcc
accgaagggtgtctcttggaacttcccaggagagggccagccctgctgcacatcgacaga
catcagatccaggcggtggagcccagtgcacaggccctggagctgcaggggttgggtgta
gatgtctacgaccaggatgtgttggagcaaggggtgcttcagcaggtggacagcgccatc
catgaggccaactgtgtggcccagctcgccgaggcggagaaggagtatcggtcagtcctg
gacgacctcacgtcatgtacgacatccttacgacagattgataaaattattgaacaactt
ggccctcaagctgccaccaacaaagatatcaacaggaaactagattctgtaaaacgacag
aagtataacaaggaacaacagctgaagaagatcacggcaaaacagaagcgactccaggcc
atccttggaggagcagaggtgaaagtggaactaggtcacggcagtctggaggaggaggat
gcagaagcagcgccgtcctgccttggcagcatgctcatgcccgctcaggagaccgcttgg
gaagagctcgtccgcactggtcagatgacaccttttggtaccaagatccctcagaagcag
gagaaaaagcccagaaaactaatgctcaatgaagcatcaggctttgaaaagtatttggca
gatcaagcgaaactgtcctttgaaagaaagaagcaagcttgtaataaaagaacagctaaa
aaagcttcggcctcggccacttctgaactgagctcagcactcaatgaaaacaaaccaggc
gagagaggcaaagttgtatcgaaaacagataaacgcctgaaaaaacaaatcaagaaactc
cagaagagggctcttcagctccaggggcaggtcggattgctaaagggaaagaaaccctgg
gattgtgatgtgagaccaaaggcacagggggactctgagggtgaagagtctgagtacttg
cccacggaggacgagctggaagagacggtgggtgctgacctgcccggggaaggcgctgac
tgcgagcagaggctggcgctcaattgccggaaacggcagaagaaagtcactgtgcaggag
gtcgatgatgacttttttccaagttctggggaagaagctgaagccacgggaggaggccgg
aaagtagtgagatgccgagacgatggagatgaagattattataagcagcgattaaggaga
tggaataaacggagactgaagaacaaagagaagagtttgagacttgaagatgattctgag
gaaagcgatgctgaatttgacgaaggttttaaaatgccgggttttctgttcaaaaagctt
tttaagtaccagcagacaggtgttaggtggctgtgggaattgcactgccagcaggcagga
ggaattctgggagacgaaatgggattgggcaagaccatccagataattgccttcttggca
ggtctgagctacagcaagatcaggactcgtggttcaaattacaggttcgaggggttgggt
ccgaccataattgtctgtccgacgacggtgatgcatcagtgggtgaaggaatttcacacg
tggtggcctccattcagagtggcagttctgcacgaaaccgggtcctttacccacaaaaag
gagaaactagttcgagacattgctcattgtcacgggattttgatcacttcttactcctac
attcgactgatgcaagatgacattagcaggcatgactggcactatgtgatcttggacgag
ggacacaaaattcgaaatccaaatgctgccatcacccttgcttgcaaacagttccgcacg
cctcatcgcatcatcctgtctggctcaccgatgcagaataacctccgagagctgtggtct
ctctttgacttcatcttcccgggaaagctgggtacattgcctgtatttatggagcagttc
tcagtccccatcaccatgggggggtattcaaacgcttccccggtacaggttaaaactgct
tataagtgtgcgtgtgtcttacgagataccataaatccatacctactgcggagaatgaag
tcggatgtcaaaatgagcctttctttgccagataaaaacgaacaggtcttattttgccgt
cttacagatgaacaacataaagtctaccaaaatttcattgattccaaagaagtttacagg
attctcaatggagagatgcagattttctctggacttgtagccctaagaaaaatctgcaac
caccctgatctcttttccggaggccccaagaatcttaaaggcattccagatgaggaacta
gaagaagatcagtttggatactggaaacgttctgggaaaatgatagtcgttgagtccttg
ctgaaaatatggcacaagcagggccaacgagtgttgctgttttctcagtccagacagatg
ctggacatccttgaagtattcctcagagcccaaaagtattcttatctcaagatggatggc
accacggcgatagcttccagacaaccactgattacaagatacaatgaggacacatccata
tttgtgtttcttctgaccactcgggtgggtggcctaggagtcaacctgacgggggcaaac
cgcgtcatcatctatgaccccgactggaacccaagcacagacacgcaggcccgggagcga
gcgtggaggattggccagaagaagcaggtgacggtgtacaggcttctgaccgcaggcacc
attgaagaaaagatctaccaccgacaaatcttcaagcagtttttgacaaatagagtgcta
aaagatccaaagcaaagacgatttttcaagtccaatgatctttatgagctgtttactctg
agtagtcctgatacatcccagagcactgaaacaagtgctatttttgcaggaactggttca
gatgtgcagacacccaaacgccatttaaaaagaagacttcaacaggcctgtggaacagac
cagaatgtcccagtggacaaacagttccctgattgtaagacgtccgcaaatgctgccatg
tcatctgaagaggtatctgcagcattggtcaatgacgtgaatgcagtaacttctgaccaa
ggcattcctctgaatgatgccgttcagacacctcatagtctaaccagcagtgagaggctt
ggagaagaggcagacacagtctccagaccacgggagtcctcagtgattcatgaaaatggg
gacagttcagattccccaagaatcagcagaacgtgcgggatgtctggtgaggaaagcatc
aatgaaaaggagagtctttctgataaaagagaaagctgccaggttcagagagaagctctt
tgggagaatgagcaaatggaaaataatttttataagcacaagtcgaaaatgaaacatcac
gtggcagaagagcccatggagaaacacctgaggccgaatcagaagccgaagagctctaag
caccgcagagacgccaagtttgagggaactcgaattccacacctggtgaagaagaggcag
taccggaggcgagaccctgaaactgagagcgaggccaaggagcgcagccacgacgactac
gtcctggagaagcttttcagaaagtcagtgggtgtgcacagtgtcatgaagcacgatgcc
atcatggacggagccagtccagaccacgtcctggtggaggcggaggccaaccgcgtggct
caggacgccctcagagctctgagactttctcggcagcagtgtctgggagcagcgtctggt
gtccccacgtggactggccacagagggcttgctggtgcaccagcaggaaaaaagagcaga
ttcggtcagaagaggaactccagtttctctgttcagcgtccctcttcaacatctccaaag
gagaaatgccaggacagcactgtgaagaaggagggaaaagatcatgtttcggagcatttt
agtggaaaagctgaagacacagagtcttcatccggggctctcacttcgtcctcactgttg
gcgaaaatgagagctagaaatcacctgattttgccagagcgcttagaaagtgaaagtggg
cgcctcccagaagccactgctccgctgccctgcagcacagaacacgatgacctgctggtg
gaaatgagaaacttcattgcctttcaggcccaagcagatggccaggccagcacccgggag
attctgcaggagtttgagtccaagttatcagcatcacagtcttgtgtctttagagaactc
ttgagaagtctgtgcacttttcatagaacttctgctggcgaaggcatttggaaactcaag
ccagaatactgctga
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integrated database retrieval system
