Bubalus kerabau (carabao): 129623176
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Entry
129623176 CDS
T11435
Symbol
USP39
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
bke Bubalus kerabau (carabao)
Pathway
bke03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129623176 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bke03041
]
129623176 (USP39)
Spliceosome [BR:
bke03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
129623176 (USP39)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
129623176
NCBI-ProteinID:
XP_055396313
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Position
11:complement(52134607..52172537)
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AA seq
565 aa
AA seq
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MSSRSKRDSRGSTRGKRESESRSSSARVKRERDREREPEAPSFRSSPVRVKREVEPASAR
EAPTPVVPVVRVKREREADEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDF
EKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYE
IIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVL
QALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEML
QAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKL
PHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILA
KFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDL
REYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQ
MITLSEAYIQIWKRRDNDETNQQGA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccggtccaagcgggattctcgcggttccacccgcgggaagcgcgagtccgag
tcgcgaagcagctcggctcgcgtcaaacgggaacgagatcgggagcgggagcccgaggcg
ccgagcttccggagcagcccagtgcgcgtgaagcgggaggtcgagccggcgagcgcgcgc
gaggccccgacgccggtagtcccggtggtgcgggtgaagcgggagcgcgaggccgacgag
gactcggaacctgagcgggaggtgcgagcaaagaatggccgcgtggattctgaggaccgg
aggagccgccactgcccgtacctggataccattaataggagtgtgctggactttgacttt
gagaaattgtgttccatctccctctcgcacatcaatgcatatgcttgtctggtgtgtggc
aagtactttcaaggccggggtttgaagtctcacgcctacattcacagtgtccagtttagt
caccatgtcttcctcaacctccacaccctcaagttttactgcctccctgacaactatgag
atcatcgattcctcactagaggatatcacgtatgtgttgaagcccactttcacaaagcag
cagattgctaacttggacaagcaagccaagttgtcccgggcatatgacggcaccacttac
ctgccaggtatcgtgggcctgaataacataaaggccaatgactacgccaacgccgtcctt
caggctctgtctaacgttcctcctctccggaactacttcctggaagaagacaattataag
aacatcaaacgtcctcctggggatatcatgttcttgttggtccagcgttttggagagctg
atgagaaaactctggaaccctcgcaatttcaaagctcatgtctctccccatgagatgctg
caggctgttgtcctctgcagcaagaagacttttcagatcacgaaacagggggatggagtt
gattttctgtcctggtttttgaatgctctacactcagctctggggggcacaaagaagaaa
aaaaagacaattgtaactgacgttttccaggggtccatgaggatcttcactaaaaaactg
cctcatcctgatctgccagcggaagagaaagagcagctgctgcataatgacgagtaccag
gagacgatggtggagtccacgtttatgtacctgacactggaccttcctaccgcccccctg
tacaaggacgagaaggagcagctcattatcccccaggtgcctctcttcaacatcctggcc
aagttcaacggcatcactgagaaggaatataagacctacaaggagaactttctgaagcgc
ttccagctcaccaagctgcctccatatctaatcttttgtattaagagattcactaagaac
aatttctttgtggagaagaatccgactattgtcaacttcccgattacaaatgtggacctg
agagagtatttgtctgaagaagtgcaggcagtgcacaagaataccacctacgacctcatc
gccaacattgtacacgacggcaaaccctccgagggctcctaccggatccacgtgctccac
catgggacaggcaaatggtatgaattacaggacctccaggtgaccgacatccttccccag
atgatcacactgtcggaggcttacattcagatttggaagaggcgagataatgatgaaacc
aaccagcagggggcatga
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