Bubalus kerabau (carabao): 129623316
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Entry
129623316 CDS
T11435
Symbol
WDR43
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
bke Bubalus kerabau (carabao)
Pathway
bke03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129623316 (WDR43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bke03009
]
129623316 (WDR43)
Ribosome biogenesis [BR:
bke03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
129623316 (WDR43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Utp12
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR3_2nd
WDR55
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
EIF3I
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_ACSF4
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
WD40_like
Beta-prop_WDR35_TULP_N
UTP15_C
NBCH_WD40
Tricorn_2nd
DUF6235
Nop14
MAT1-1-2
Zip
Nop52
Motif
Other DBs
NCBI-GeneID:
129623316
NCBI-ProteinID:
XP_055396584
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Position
11:complement(73714672..73753360)
Genome browser
AA seq
681 aa
AA seq
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MAAGGGGVADPLSPAGVPCAFSPQSQAYFALASTDGHLRVWETANNRLHQEYVPSAHLSG
TCTCLAWAPARLQAKEGPQRKKRKSEAIVTSNQADLLALGTAVGSILLYSTVKGELHSKL
INGGHDNRVNCIQWHQDNGCLYSCSDDKHIVEWNTQTCKVKCKWKGDNSSVSSLCISPDG
KMLLSAGRTIKLWVLETKEVYRHFTGHATPVSSLTFTTIRPPNESQPFDGITGLYFLSGA
VHDRLLNVWQVRSENKEKNAVMSFTVTDEPVYIDLTLSENKEEPVKLAVVCRDGQVHLFE
HILNGYCKKPLTSNCTIQIATPGKGKKSTPKPIPILAAGFCSDKMSLLLVYGNWFQPTIE
RVALNPKEPHMCLIRDISNCWAPKVETAITKVRTPVMNSEAKVLVPGIPGHHAAIKPAPP
QTKEVESKRKLGEKEVSIEERLGALDIASKKEKDDLPQTNSFPVLLTQGLESNDFEILNK
VLQTRNLNLIKRTVLRMPLHAVIPLLQELTKRLQGHPNSAILMVQWLKCVLTVHASYLST
LPDLVPQLGTLYQLMESRVKTFQKLSHLHGKLILLITQVTASEKTKETTCPAQKAKLVYE
EESSEEESDDEIADKDSDDNWDEDEDEKASEKDEDVDEENEEEEGDDEDKDEENGEDRDV
ASEKELNGDSDLDPENESEEE
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggtggcggtggtgttgccgaccccctgtcccccgcgggggtcccctgcgct
ttctccccgcagagccaggcctatttcgctttagcgtctaccgacggtcacctgcgagtg
tgggagacagccaacaaccggctacaccaggagtacgtgccttccgcgcacctcagcggt
acctgcacctgcctggcctgggcgccagcgaggctgcaggccaaggaaggtccacagagg
aaaaaaaggaaatcagaagctatagtaacaagtaaccaggctgacttgttggctcttggt
acagcagttggtagtattttattatacagtacagtaaaaggagaattacacagtaaattg
ataaatggtggacatgacaacagagtcaattgcatacagtggcatcaagacaatggctgt
ttgtatagttgttcagatgataaacatattgtggaatggaacacacagacatgcaaagta
aagtgcaaatggaaaggtgataatagcagtgtcagttccctgtgtatcagcccagatgga
aagatgttgctttcagctggtcgaacaatcaaactatgggttttggagaccaaagaagtc
tacagacacttcacaggacatgcgacaccagtttcatcacttacgttcactactatcaga
cctcctaatgagagccaaccctttgatggaattacaggtctttatttcttatctggagca
gtccatgaccggttacttaatgtctggcaggtccggtcagaaaacaaagagaagaatgca
gtgatgtcttttacagttacagatgagcctgtctatattgacttgactttgtcagaaaac
aaagaggagcctgtcaagttagctgttgtttgcagagatggtcaagttcatctttttgaa
cacatactaaatgggtactgcaaaaagcctttgacttcgaactgtacaattcagatagca
acacctgggaaaggcaagaaatcaacaccaaaacctatccctattttagcagctggtttc
tgctcagacaaaatgtcattgttgcttgtgtatggcaattggtttcagcccaccattgag
cgagtggctttgaatcccaaagaacctcatatgtgtttaataagagatatttcaaactgc
tgggccccaaaagtagaaacagctataacaaaggtgaggacaccagtgatgaattctgaa
gcaaaagttctggtgcctgggatacctggtcatcacgcagctatcaagcctgctcctcca
cagaccaaggaagtagagagcaagaggaaattgggggaaaaggaggttagcattgaagaa
cgcctgggagccctggatatagcttcaaaaaaagaaaaggacgaccttccacagacaaat
agttttccagttctcctcacacagggcttagaaagtaatgattttgaaattctaaataaa
gtacttcaaactaggaatttaaacttaataaagagaactgtattaaggatgcccctgcat
gctgttattccgttgttgcaagagcttacaaagagattacaaggacatcctaatagtgct
attttaatggttcagtggctaaaatgtgtgttaacggtccatgcatcctacttatccaca
ttgcctgacttggtaccccagctggggacactgtaccagttaatggaaagcagagtaaaa
acttttcagaagctctcccaccttcatggaaagctcatccttctaatcacacaagttaca
gcgtcagagaaaacaaaggaaacgacttgtcctgctcagaaggcaaagttggtgtatgaa
gaagaatcttctgaagaggaatctgatgatgaaatagcagataaggattctgatgataat
tgggatgaagatgaggatgagaaagcaagtgaaaaagatgaggatgttgatgaagagaat
gaagaggaagaaggggatgatgaagacaaagatgaagaaaatggtgaggacagagatgtg
gcaagtgaaaaggaattaaatggagattctgatttagatcctgagaatgaaagtgaagaa
gaatga
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