KEGG   Bubalus kerabau (carabao): 129623316
Entry
129623316         CDS       T11435                                 
Symbol
WDR43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
bke  Bubalus kerabau (carabao)
Pathway
bke03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:bke00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    129623316 (WDR43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bke03009]
    129623316 (WDR43)
Ribosome biogenesis [BR:bke03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    129623316 (WDR43)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Utp12 Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_WDR3_2nd WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_SPT8 EIF3I WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_ACSF4 Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_WDR75_1st Beta-prop_IFT122_1st WD40_like Beta-prop_WDR35_TULP_N UTP15_C NBCH_WD40 Tricorn_2nd DUF6235 Nop14 MAT1-1-2 Zip Nop52
Other DBs
NCBI-GeneID: 129623316
NCBI-ProteinID: XP_055396584
LinkDB
Position
11:complement(73714672..73753360)
AA seq 681 aa
MAAGGGGVADPLSPAGVPCAFSPQSQAYFALASTDGHLRVWETANNRLHQEYVPSAHLSG
TCTCLAWAPARLQAKEGPQRKKRKSEAIVTSNQADLLALGTAVGSILLYSTVKGELHSKL
INGGHDNRVNCIQWHQDNGCLYSCSDDKHIVEWNTQTCKVKCKWKGDNSSVSSLCISPDG
KMLLSAGRTIKLWVLETKEVYRHFTGHATPVSSLTFTTIRPPNESQPFDGITGLYFLSGA
VHDRLLNVWQVRSENKEKNAVMSFTVTDEPVYIDLTLSENKEEPVKLAVVCRDGQVHLFE
HILNGYCKKPLTSNCTIQIATPGKGKKSTPKPIPILAAGFCSDKMSLLLVYGNWFQPTIE
RVALNPKEPHMCLIRDISNCWAPKVETAITKVRTPVMNSEAKVLVPGIPGHHAAIKPAPP
QTKEVESKRKLGEKEVSIEERLGALDIASKKEKDDLPQTNSFPVLLTQGLESNDFEILNK
VLQTRNLNLIKRTVLRMPLHAVIPLLQELTKRLQGHPNSAILMVQWLKCVLTVHASYLST
LPDLVPQLGTLYQLMESRVKTFQKLSHLHGKLILLITQVTASEKTKETTCPAQKAKLVYE
EESSEEESDDEIADKDSDDNWDEDEDEKASEKDEDVDEENEEEEGDDEDKDEENGEDRDV
ASEKELNGDSDLDPENESEEE
NT seq 2046 nt   +upstreamnt  +downstreamnt
atggcggcgggtggcggtggtgttgccgaccccctgtcccccgcgggggtcccctgcgct
ttctccccgcagagccaggcctatttcgctttagcgtctaccgacggtcacctgcgagtg
tgggagacagccaacaaccggctacaccaggagtacgtgccttccgcgcacctcagcggt
acctgcacctgcctggcctgggcgccagcgaggctgcaggccaaggaaggtccacagagg
aaaaaaaggaaatcagaagctatagtaacaagtaaccaggctgacttgttggctcttggt
acagcagttggtagtattttattatacagtacagtaaaaggagaattacacagtaaattg
ataaatggtggacatgacaacagagtcaattgcatacagtggcatcaagacaatggctgt
ttgtatagttgttcagatgataaacatattgtggaatggaacacacagacatgcaaagta
aagtgcaaatggaaaggtgataatagcagtgtcagttccctgtgtatcagcccagatgga
aagatgttgctttcagctggtcgaacaatcaaactatgggttttggagaccaaagaagtc
tacagacacttcacaggacatgcgacaccagtttcatcacttacgttcactactatcaga
cctcctaatgagagccaaccctttgatggaattacaggtctttatttcttatctggagca
gtccatgaccggttacttaatgtctggcaggtccggtcagaaaacaaagagaagaatgca
gtgatgtcttttacagttacagatgagcctgtctatattgacttgactttgtcagaaaac
aaagaggagcctgtcaagttagctgttgtttgcagagatggtcaagttcatctttttgaa
cacatactaaatgggtactgcaaaaagcctttgacttcgaactgtacaattcagatagca
acacctgggaaaggcaagaaatcaacaccaaaacctatccctattttagcagctggtttc
tgctcagacaaaatgtcattgttgcttgtgtatggcaattggtttcagcccaccattgag
cgagtggctttgaatcccaaagaacctcatatgtgtttaataagagatatttcaaactgc
tgggccccaaaagtagaaacagctataacaaaggtgaggacaccagtgatgaattctgaa
gcaaaagttctggtgcctgggatacctggtcatcacgcagctatcaagcctgctcctcca
cagaccaaggaagtagagagcaagaggaaattgggggaaaaggaggttagcattgaagaa
cgcctgggagccctggatatagcttcaaaaaaagaaaaggacgaccttccacagacaaat
agttttccagttctcctcacacagggcttagaaagtaatgattttgaaattctaaataaa
gtacttcaaactaggaatttaaacttaataaagagaactgtattaaggatgcccctgcat
gctgttattccgttgttgcaagagcttacaaagagattacaaggacatcctaatagtgct
attttaatggttcagtggctaaaatgtgtgttaacggtccatgcatcctacttatccaca
ttgcctgacttggtaccccagctggggacactgtaccagttaatggaaagcagagtaaaa
acttttcagaagctctcccaccttcatggaaagctcatccttctaatcacacaagttaca
gcgtcagagaaaacaaaggaaacgacttgtcctgctcagaaggcaaagttggtgtatgaa
gaagaatcttctgaagaggaatctgatgatgaaatagcagataaggattctgatgataat
tgggatgaagatgaggatgagaaagcaagtgaaaaagatgaggatgttgatgaagagaat
gaagaggaagaaggggatgatgaagacaaagatgaagaaaatggtgaggacagagatgtg
gcaagtgaaaaggaattaaatggagattctgatttagatcctgagaatgaaagtgaagaa
gaatga

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