KEGG   Bubalus kerabau (carabao): 129623438
Entry
129623438         CDS       T11435                                 
Symbol
GEN1
Name
(RefSeq) flap endonuclease GEN homolog 1
  KO
K15338  holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
bke  Bubalus kerabau (carabao)
Brite
KEGG Orthology (KO) [BR:bke00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bke03400]
    129623438 (GEN1)
DNA repair and recombination proteins [BR:bke03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     129623438 (GEN1)
SSDB
Motif
Pfam: XPG_I Chromo_2 XPG_N Chromo_SEND1 SpoU_methylas_C
Other DBs
NCBI-GeneID: 129623438
NCBI-ProteinID: XP_055396858
LinkDB
Position
11:complement(83743743..83774488)
AA seq 910 aa
MGVNDLWQILEPVKQHVHLHSLSGKTIAVDLSLWVCEAQTVKKMIGTVMKPHLRNLFFRI
SYLTLMDVKLVFVMEGEPPHLKADVISKRNQVRYGPSGKTWSQKTGRSYFKSVLKECLDM
LECLGIPWVQAAGEAEAMCAYLNASGYVDGCLTNDGDAFLYGAQTVYRNFTMNTKDPHVD
CYTMSSINSKLGLNRDALVGLAILLGCDYLPKGVPGVGKEQALKLIKILKGQSLLQRFNQ
WSEKSCYSNSQPVLVNKLAHCSVCSHPGSSKDHERNGCKLCQTDRYCEPHDYEYSCPCEW
HRTEHERQLNAVENNIKKKACSCEGFPFHEVTQEFLLNKDKLVKTVRYQRPDLLLFQRFT
FEKMEWPNHYACEKLLTLLTHYDMTERKLGRRHSNQLQPIRIVKNRIRNGVHCFEIEWEK
PEHYAIEDKHGELAVQTIEEESLFEAAYPEIVAIYQKQKSENKGKKQKSMKIKSKGNSLL
ESDEMMKVQSHMTLKPTWEIFPDQNSKLSLEISPDSTSPEESISTSLNVLLLAEDAACLT
TQEQLISSPRSLAMQQIKDISKSLIAESSQPSTSSHNISAVADLHLSTIDWEGTSFSTSF
SDSPAIPRNTFTHDLKLELETAIPDSFKNNPEQLYCEAERHTTSVNKLSRWDLQKTNPEE
HLLSGISDLHLQDLPLKERILIKSYSQNTVEPDVGLKTLSLLTVKEQCIANSTSRCPPHL
SKDLGIHLQNESRNCKVLKGDQLFQENDKSSTSVPLSVNNPGTKTSSVRTGPPNATLDHS
RKAGVQIARKTVMKKSVCLDRLSSDEESVPKFGKAKSTTQKMKQSSQKHSPTQFKKNDPN
KLSNPKAYIKEIEQCVQAYKTARNEEACLPDAAKEPPSFLHNHKDKDDSGTCLDSPLPLS
QRLKLRFQNT
NT seq 2733 nt   +upstreamnt  +downstreamnt
atgggagtaaatgacttgtggcaaattttggagcctgtgaaacaacacgtacacttgcac
agtctcagtgggaaaaccattgcagttgatctgagtctctgggtatgtgaagcacagaca
gtcaaaaaaatgattgggacagtcatgaagccccacctcagaaatctattttttcgtatc
tcatatttaacactaatggatgtaaagctggtgtttgttatggaaggggaacccccgcac
ctgaaagctgatgtcatcagtaagaggaatcaggtccgatatggaccttctggaaaaaca
tggtctcagaaaacagggagatcatattttaagtcagtcttaaaggagtgtcttgatatg
ctggaatgcttaggaattccctgggtccaagctgctggtgaagctgaagccatgtgtgca
tacctcaacgccagtggttatgtggatggctgcctcaccaatgatggagacgctttcctt
tatggggcccagactgtttacaggaatttcactatgaacaccaaggacccacatgttgac
tgttacacaatgtcatccatcaatagtaaactaggtttgaatagagatgctctggttggg
ctggcaatactacttggctgtgattatcttccaaagggagtccctggagttggaaaagag
caagcattaaaactgataaagattttgaaagggcaaagtttacttcagaggtttaatcag
tggagtgaaaaatcttgctactctaattcacaaccagtacttgttaacaaactggctcat
tgctctgtgtgttcccatccaggttcatctaaggatcatgaacgtaatggatgcaaatta
tgtcaaactgatcgatactgtgaaccacatgattatgaatactcttgtccttgtgaatgg
caccgtacagaacatgagaggcaactgaatgccgtagaaaacaatattaagaaaaaagct
tgcagttgtgagggattcccattccatgaggttactcaagaattccttctgaacaaggat
aaattggtgaagacagtcaggtaccaaagacctgatttattattgtttcagagatttact
tttgaaaaaatggagtggcccaatcactatgcatgtgagaaattgttgacactgttgacc
cactatgacatgacagaaaggaagctcggtcgaaggcactctaatcaactgcagccgatt
cgaatcgttaaaaaccgaatcagaaatggagttcattgttttgaaatagaatgggaaaag
cctgaacattatgctatagaagataaacatggagaattggctgtacaaacaatagaagaa
gagtcattgtttgaagcagcttatcctgagattgttgctatttaccaaaaacaaaagtca
gaaaataaagggaagaaacaaaaaagcatgaaaattaagtctaaaggaaacagtttgcta
gaatcagatgagatgatgaaagttcagtcacatatgactttaaaacccacatgggaaatc
tttcctgatcagaattctaagttaagcttggaaatttcccctgattctacatcacccgag
gaatctatttccacatcattgaatgtcttgcttttagctgaagatgctgcctgtttgact
acacaagaacagttaatatcttctccaagatctttggctatgcagcaaattaaagatatc
agtaagtctctaattgcagaatctagtcaacctagtacctcatcccataatatatccgca
gttgctgatctgcacttgagcaccatcgactgggaaggtacttcttttagtacttctttt
agtgattctccagccatccccaggaacacatttactcatgatttaaaattggaacttgaa
acagctattcctgacagttttaaaaataatccagagcagttgtattgtgaagcagaacgg
cacaccaccagtgttaataaactgtcccgttgggatcttcagaagactaatcctgaggag
cacctactttctggcattagtgatttacatcttcaggatttacccttaaaggaacgaata
cttataaaatcatattctcagaatactgtagaaccagacgttggcctaaaaactttgtcc
ctacttactgtaaaagaacagtgtattgctaatagtacttctcgttgtccaccacatctt
tccaaggatctaggaattcatttgcaaaatgaatctagaaactgtaaagttctaaaagga
gaccagctatttcaagaaaatgataaatcaagtacatctgtacccttgtctgtcaataac
ccaggaacgaaaacctccagtgttagaactgggccaccaaatgctactttagatcatagt
agaaaagctggtgttcaaatcgctcggaaaactgtaatgaagaagagcgtgtgccttgac
agactttcctctgatgaagagagtgtcccaaagtttgggaaagctaaatccacaactcaa
aaaatgaagcagagttctcagaagcatagcccaacccagttcaagaaaaatgatcccaac
aaattgagtaaccctaaggcatatattaaagaaattgagcagtgtgtccaggcttataaa
acagctagaaatgaagaagcctgtctcccagatgcagcaaaagagcctccgagttttcta
cataaccataaggataaagatgactctggtacctgtttggatagtcctcttcctttaagt
cagagattaaaactaaggttccaaaacacttga

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