Bubalus kerabau (carabao): 129623438
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Entry
129623438 CDS
T11435
Symbol
GEN1
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
bke Bubalus kerabau (carabao)
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bke03400
]
129623438 (GEN1)
DNA repair and recombination proteins [BR:
bke03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
129623438 (GEN1)
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
SpoU_methylas_C
Motif
Other DBs
NCBI-GeneID:
129623438
NCBI-ProteinID:
XP_055396858
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Position
11:complement(83743743..83774488)
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AA seq
910 aa
AA seq
DB search
MGVNDLWQILEPVKQHVHLHSLSGKTIAVDLSLWVCEAQTVKKMIGTVMKPHLRNLFFRI
SYLTLMDVKLVFVMEGEPPHLKADVISKRNQVRYGPSGKTWSQKTGRSYFKSVLKECLDM
LECLGIPWVQAAGEAEAMCAYLNASGYVDGCLTNDGDAFLYGAQTVYRNFTMNTKDPHVD
CYTMSSINSKLGLNRDALVGLAILLGCDYLPKGVPGVGKEQALKLIKILKGQSLLQRFNQ
WSEKSCYSNSQPVLVNKLAHCSVCSHPGSSKDHERNGCKLCQTDRYCEPHDYEYSCPCEW
HRTEHERQLNAVENNIKKKACSCEGFPFHEVTQEFLLNKDKLVKTVRYQRPDLLLFQRFT
FEKMEWPNHYACEKLLTLLTHYDMTERKLGRRHSNQLQPIRIVKNRIRNGVHCFEIEWEK
PEHYAIEDKHGELAVQTIEEESLFEAAYPEIVAIYQKQKSENKGKKQKSMKIKSKGNSLL
ESDEMMKVQSHMTLKPTWEIFPDQNSKLSLEISPDSTSPEESISTSLNVLLLAEDAACLT
TQEQLISSPRSLAMQQIKDISKSLIAESSQPSTSSHNISAVADLHLSTIDWEGTSFSTSF
SDSPAIPRNTFTHDLKLELETAIPDSFKNNPEQLYCEAERHTTSVNKLSRWDLQKTNPEE
HLLSGISDLHLQDLPLKERILIKSYSQNTVEPDVGLKTLSLLTVKEQCIANSTSRCPPHL
SKDLGIHLQNESRNCKVLKGDQLFQENDKSSTSVPLSVNNPGTKTSSVRTGPPNATLDHS
RKAGVQIARKTVMKKSVCLDRLSSDEESVPKFGKAKSTTQKMKQSSQKHSPTQFKKNDPN
KLSNPKAYIKEIEQCVQAYKTARNEEACLPDAAKEPPSFLHNHKDKDDSGTCLDSPLPLS
QRLKLRFQNT
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgggagtaaatgacttgtggcaaattttggagcctgtgaaacaacacgtacacttgcac
agtctcagtgggaaaaccattgcagttgatctgagtctctgggtatgtgaagcacagaca
gtcaaaaaaatgattgggacagtcatgaagccccacctcagaaatctattttttcgtatc
tcatatttaacactaatggatgtaaagctggtgtttgttatggaaggggaacccccgcac
ctgaaagctgatgtcatcagtaagaggaatcaggtccgatatggaccttctggaaaaaca
tggtctcagaaaacagggagatcatattttaagtcagtcttaaaggagtgtcttgatatg
ctggaatgcttaggaattccctgggtccaagctgctggtgaagctgaagccatgtgtgca
tacctcaacgccagtggttatgtggatggctgcctcaccaatgatggagacgctttcctt
tatggggcccagactgtttacaggaatttcactatgaacaccaaggacccacatgttgac
tgttacacaatgtcatccatcaatagtaaactaggtttgaatagagatgctctggttggg
ctggcaatactacttggctgtgattatcttccaaagggagtccctggagttggaaaagag
caagcattaaaactgataaagattttgaaagggcaaagtttacttcagaggtttaatcag
tggagtgaaaaatcttgctactctaattcacaaccagtacttgttaacaaactggctcat
tgctctgtgtgttcccatccaggttcatctaaggatcatgaacgtaatggatgcaaatta
tgtcaaactgatcgatactgtgaaccacatgattatgaatactcttgtccttgtgaatgg
caccgtacagaacatgagaggcaactgaatgccgtagaaaacaatattaagaaaaaagct
tgcagttgtgagggattcccattccatgaggttactcaagaattccttctgaacaaggat
aaattggtgaagacagtcaggtaccaaagacctgatttattattgtttcagagatttact
tttgaaaaaatggagtggcccaatcactatgcatgtgagaaattgttgacactgttgacc
cactatgacatgacagaaaggaagctcggtcgaaggcactctaatcaactgcagccgatt
cgaatcgttaaaaaccgaatcagaaatggagttcattgttttgaaatagaatgggaaaag
cctgaacattatgctatagaagataaacatggagaattggctgtacaaacaatagaagaa
gagtcattgtttgaagcagcttatcctgagattgttgctatttaccaaaaacaaaagtca
gaaaataaagggaagaaacaaaaaagcatgaaaattaagtctaaaggaaacagtttgcta
gaatcagatgagatgatgaaagttcagtcacatatgactttaaaacccacatgggaaatc
tttcctgatcagaattctaagttaagcttggaaatttcccctgattctacatcacccgag
gaatctatttccacatcattgaatgtcttgcttttagctgaagatgctgcctgtttgact
acacaagaacagttaatatcttctccaagatctttggctatgcagcaaattaaagatatc
agtaagtctctaattgcagaatctagtcaacctagtacctcatcccataatatatccgca
gttgctgatctgcacttgagcaccatcgactgggaaggtacttcttttagtacttctttt
agtgattctccagccatccccaggaacacatttactcatgatttaaaattggaacttgaa
acagctattcctgacagttttaaaaataatccagagcagttgtattgtgaagcagaacgg
cacaccaccagtgttaataaactgtcccgttgggatcttcagaagactaatcctgaggag
cacctactttctggcattagtgatttacatcttcaggatttacccttaaaggaacgaata
cttataaaatcatattctcagaatactgtagaaccagacgttggcctaaaaactttgtcc
ctacttactgtaaaagaacagtgtattgctaatagtacttctcgttgtccaccacatctt
tccaaggatctaggaattcatttgcaaaatgaatctagaaactgtaaagttctaaaagga
gaccagctatttcaagaaaatgataaatcaagtacatctgtacccttgtctgtcaataac
ccaggaacgaaaacctccagtgttagaactgggccaccaaatgctactttagatcatagt
agaaaagctggtgttcaaatcgctcggaaaactgtaatgaagaagagcgtgtgccttgac
agactttcctctgatgaagagagtgtcccaaagtttgggaaagctaaatccacaactcaa
aaaatgaagcagagttctcagaagcatagcccaacccagttcaagaaaaatgatcccaac
aaattgagtaaccctaaggcatatattaaagaaattgagcagtgtgtccaggcttataaa
acagctagaaatgaagaagcctgtctcccagatgcagcaaaagagcctccgagttttcta
cataaccataaggataaagatgactctggtacctgtttggatagtcctcttcctttaagt
cagagattaaaactaaggttccaaaacacttga
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