Bubalus kerabau (carabao): 129624327
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Entry
129624327 CDS
T11435
Symbol
ZC3H13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
bke Bubalus kerabau (carabao)
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bke03019
]
129624327 (ZC3H13)
Messenger RNA biogenesis [BR:
bke03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
129624327 (ZC3H13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
zf-CCCH_4
zf-CCCH_PAN3
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
129624327
NCBI-ProteinID:
XP_055398019
LinkDB
All DBs
Position
12:complement(16790660..16894045)
Genome browser
AA seq
1680 aa
AA seq
DB search
MSKIRRKVTVENTKTISDSTSRRPSVFERLGPSTGSTAETQCRNWLKTGNCLYGNTCRFV
HGPSPRGKGYSSSYRRSPERPTGDLRERMKNKRQDVDSESQKRNTEESSSPVRKESSRGR
HREKEDIKITKERTPESEEENVEWETNRDDSDNGDINYDYVHELSLEMKRQKIQRELMKL
EQENMEKREEIIIKKEVSPEVVRSKLSPSPSLRKSSKSPKRKSSPKSSSSTSKKDRKTTA
VSSPLLDQQRNSKSNQSKKKGPRTPSPPPPIQEDIALGKKYKEKYKLKDRIEEKPRDGKD
RGRDFERQREKRDKPRSTSPAGQHHSPISSRHHSSSSQSGSSIQRHSPSPRRKRTPSPSY
QRTITPPLRRSASPYPSHSLASPQRKQSPPRHRSPVREKGRHDHERASQSHDRRHERREE
TRGKRDREKDTREEREYEQDQSSSRDHRDDREPRDGRDRRDARDTRDRRELRDSRDVRDS
REMRDYSRDNKESRDPRDSRSTRDAHDYRDRESRDAHRKEDAYQEESRSYGRNHLREESS
RTEIRNDSRNESRSEIRNDRMGRSRGRAPEMPEKGSRGTRGSQIDSHGSSSNYHDSWETR
SSYPERDRYPERDNREQARDSSFERRHGERDRRDNRERAPMFYTSCCPYPLPPVFSGPAG
GTEKIRDQRPSSPIRHQGRNDELERDERREERRVDRTDDRRDERARERDRERERERERER
ERERDREREKERELERERAAREREREREREKERDRERERDREHDREREREREREREKERE
REREERERERERERERERERERERARERERERERQREWEDKEKAREDRREKREDLREDRN
PREGHEERKSKKRYRNEGSPSPRQSPKRRREHSPDSDAYNSGDDKNEKHRLLSQVVRPQE
SRSLSPSHLTEDRQGRWREDDRKPERKESSRRYEEQDFKEKVSSVDKQREQTEITESSRT
RSQDLTGHHPSEDRDTSDGAYEESKRKAKIQKKPIKRKKDDDVGMGRGNTEIASEDGQVF
SPKKGQKKKSVEKKRKRSRGDSDISDEETVQQSKKKRGPRTPPITAKEEPADMPSDKDGA
LEDPQKKEDTAFSDWSDEDVPDRTDLTEPEHAATAATPGRTPSPSSLPPPPPPLAATAAT
PATAFSTSTTTISTSTLPTTNTSFTSEDSHRKCHRTRAEKVEAPHVTIEDTPHRKPVDQK
RSSSLGSNRSNRSHTSGRLRSPSNDSAHRSGDDQNGRKRVLHSGSRDREKTKSLEITGER
KSRIDQLKRGEPSRSTSSDRQDSRSHSSRRSSPESDRQVHSRSGSFDSRERLQERDRYEH
ERERERERRDVRQRDWERDADKDWPRNRDRDRLRERERERDKRRDLDRERERLLSDALER
DRERDRDRTFEGSQVESVKRSEVKLESEHDRDLEGSSRESGALDKERLDKDLGSVQGFED
TSRAERTESVEAGDDESKLDDVHSLGSGAGEGYEPISDDELDEILAGDAEKREDQQDEEK
MPDPLDVIDVDWSGLMPKHPKEPREPGAALLKFTPGAVMLRVGISKKLAGPELFTKVKET
CQRLLEKPKDTDSLFEHELGALNMAALLRKEERANLLSNLGPCCKALCFRRDSAIRKQLV
KNEKGTVKQAYTNAPMVDNELLRLSLRLFKRKTMCQAPGPEKTEDNKLSQSSIQQELCVS
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaattagaaggaaggtcactgtggaaaataccaagaccatatctgatagcaca
tcccgaagacccagtgtatttgaaaggcttggacccagcactggcagtacagcggagaca
cagtgccgtaactggctgaagactggcaactgcctctatggaaacacatgtagattcgta
catggcccttcaccccgtggtaaaggttatagcagcagttatagaaggtcaccagaaaga
cctacaggggatcttagagaaagaatgaagaacaagcgccaagatgtggactctgagtcc
cagaaacgaaatacagaggaatcatcctcacctgttaggaaagaatcttcaagagggaga
catagggaaaaggaagacataaaaatcactaaggagagaactccagaaagtgaagaagaa
aatgtagaatgggaaactaatagagatgattctgacaacggagatattaattatgattat
gttcatgagttgtcattggaaatgaagcgtcaaaagatacagagggaattaatgaagctg
gaacaagaaaacatggagaaaagagaagaaattattattaaaaaggaggtttcaccagaa
gtggttagatcaaagttgtctccatcaccttctctaagaaagtctagcaaatctccaaag
agaaaatcaagccctaagtcatcatcttcaactagcaagaaagacaggaagacaactgca
gtttcctctccattgttggaccagcagaggaattcaaaaagcaaccaaagtaagaagaaa
ggacctcgaactcctagccctccccctcctatacaggaagatattgctctggggaaaaaa
tacaaagaaaaatataaattgaaagacaggatagaggaaaaaccaagagatggaaaggac
agaggacgagattttgaaagacaaagagaaaaaagagacaagccgagatccacttcccca
gcaggacaacatcattctccaatatcttctagacatcactcatcttcctcacagtcagga
tcgtcgattcaaagacattctccttctcctcgccgaaaaagaactccttcaccatcttat
cagaggacaataactccacctttacgccgctctgcttctccctatccttcacattctctg
gcttctcctcagagaaagcaaagccctccaagacatcgctctccagtgagagagaagggg
aggcacgatcatgagcgagcttcacagtctcacgatcggcgtcatgaaaggagggaagag
actagaggtaaaagggacagagaaaaggacacaagagaagaacgagagtatgaacaggat
cagagctcttctcgagaccacagggatgaccgagaacctcgagatgggcgggatcggaga
gatgccagagatactagagaccgaagggaactaagagactctagagatgttcgggactcc
agagagatgagagattacagcagagataacaaagagagccgtgaccccagggattctcgg
tctactcgtgatgcccatgactacagggaccgtgaaagtcgagatgctcatcgaaaggag
gacgcgtatcaggaagaatcccgaagttatggcagaaaccatctgagagaagaaagttct
cgcactgaaataaggaatgactccagaaatgagtctcgaagtgagattaggaatgaccgg
atgggcagaagtagaggaagagctccagagatgcctgaaaagggaagtcgaggcacaaga
ggttctcagattgatagtcacggtagtagtagcaactatcatgacagctgggagacgcga
agcagctatcctgaaagagacagataccctgagagagacaacagagagcaagcaagagat
tcttcatttgagagaagacacggggagagagaccgtcgcgacaacagagagagagctcct
atgttctacacctcctgctgcccctatcctttgccaccagtgttctcaggccctgctggg
gggacagagaagatcagagatcaaagaccaagctcaccaattcgacatcagggaaggaat
gacgagcttgagcgtgatgaacgaagagaggaacgaagagtagacagaacggatgataga
agagacgaaagggctagggagagagacagggagcgggagcgcgagcgggagagggagcgc
gagcgggagagggaccgggaaagagagaaagagagagaactggaaagagagcgggcggcg
cgggagcgcgagcgcgagagagaaagagagaaggagagagaccgggagcgagagcgtgac
cgggagcatgacagagagagggagagagagagggagcgcgagcgggagaaagagcgggag
cgggagcgcgaagagagggagcgcgagcgcgagcgggagagggagcgcgaacgtgagcgc
gagcgggagagagcgagggagagggagcgcgagcgcgagcgccagagggagtgggaagac
aaggagaaagctcgcgaggaccgcagggaaaagcgggaagatctgcgagaagaccggaac
cccagagaaggccacgaggagagaaagtccaagaagcgctatagaaatgaagggagtcct
agccctcgtcagtcacctaagcgccggcgagagcattctcctgacagtgacgcctacaac
agtggagatgataaaaatgaaaaacacaggctcttgagccaggttgttcgacctcaagaa
tcacgttctcttagtccatcacaccttacagaagacaggcagggtagatggagagaagac
gatcgtaaaccagaaagaaaagaaagttcaaggcgctatgaagagcaggatttcaaagag
aaagtttcttctgtagataagcagagagaacagacagaaatcacagaaagctccagaact
cgttcacaagacctgacaggacaccacccatccgaagatcgagacacctctgatggagct
tatgaggagagcaagagaaaagcaaagattcaaaagaaacctattaagagaaagaaggat
gatgatgttggaatggggaggggtaacacagagatagcatctgaagatggtcaagtattt
tcaccaaaaaaaggacagaagaagaaaagtgttgaaaagaagcgtaagcggtccagaggt
gattctgacatctctgatgaagaaacggtgcagcagagtaagaagaaaagaggcccgagg
actccgcctatcacagccaaagaggagccggctgacatgcccagtgataaggatggtgct
ctggaggaccctcagaagaaagaggatacagcgttcagtgactggtctgatgaggacgtg
cctgaccgcacggacctgacggagccagagcacgccgccactgccgccacccctggaagg
accccttcgccgtcttctctccctcctccaccgcctcctttggctgctactgcggccacc
cctgccacggccttcagcacatcgaccaccaccatttccacctccaccctccccaccacc
aatacatcttttaccagtgaagactcccataggaagtgccacagaacacgggcggaaaag
gtagaggcgcctcatgttactatagaagacacaccacatcgcaagccagtggatcagaag
cggagcagcagcctcggcagcaaccggagcaatcgcagtcacacgtctggccgtctccgc
tccccatccaacgactctgctcatcgaagtggggatgaccagaacggtcgaaagagagtg
ctgcatagcggctcaagagacagagaaaaaactaaaagtctggaaatcacaggagagaga
aaatccagaattgatcagctaaagcgtggagaacctagtcgaagtacttcctcagatcgc
caggattcaagaagccatagttccagaagaagttctcctgagtcagatcgacaggtccat
tcaagatcagggtcgtttgacagcagagagaggcttcaagagcgcgaccgttatgagcac
gagagagagcgggagcgagaaaggagggacgtccggcagagagactgggagcgggatgcc
gataaagattggccccggaatagggaccgggatcgactgcgggaacgggagagggaacgg
gacaaaaggagagacttagacagggagagggagagactactctctgatgccctggaaagg
gaccgggagagggacagggacagaacgtttgagggttctcaagtagagtctgtgaaacgc
agtgaagtcaaactggagagtgagcatgacagagacctagaaggcagttcccgagagtct
ggagctttggataaagaaaggctggataaagatctgggatctgtgcagggatttgaagat
acaagtagagctgagaggactgagagtgtggaagcaggagacgatgaatccaagctagat
gatgtgcattcattgggatctggtgctggagaaggatacgagccaattagtgatgatgaa
ctggatgaaattctggcaggtgatgctgaaaagcgggaggaccaacaggatgaggagaag
atgccagatccgctagatgtgatagacgtggattggtctggtcttatgccaaagcatcca
aaagagccacgagagcctggggccgcgctcttaaaattcacacctggagctgttatgctg
cgagttggcatttctaaaaagttggctggtcctgagctctttacgaaagtcaaggaaaca
tgtcagagacttttagaaaagcccaaagatacagacagtctctttgaacatgaactcggg
gctctcaacatggctgcattactacgaaaagaggaaagagcgaatctgcttagtaatctc
ggaccatgttgtaaagcgttatgcttcagacgggattctgcaatccgaaagcagcttgtt
aaaaatgagaagggcaccgtaaaacaagcttatacaaatgctccaatggtagataatgaa
ctgttacgactgagtcttcgattatttaagcgaaagacaatgtgccaagccccgggacct
gaaaagactgaagataataaactttcacagtccagtattcaacaggaactctgtgtgtct
taa
DBGET
integrated database retrieval system
