Bubalus kerabau (carabao): 129624563
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Entry
129624563 CDS
T11435
Symbol
DIS3
Name
(RefSeq) exosome complex exonuclease RRP44 isoform X1
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
bke Bubalus kerabau (carabao)
Pathway
bke03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129624563 (DIS3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bke03019
]
129624563 (DIS3)
Messenger RNA biogenesis [BR:
bke03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
129624563 (DIS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
Toxin_R_bind_C
Motif
Other DBs
NCBI-GeneID:
129624563
NCBI-ProteinID:
XP_055398604
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All DBs
Position
12:complement(48042206..48066129)
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AA seq
958 aa
AA seq
DB search
MLKSKTFLKKTRAGGVMKIVREHYLRDDIGCGASGCAACDGAHEGPVLELQPLDRASSLC
PQPHYLLPDTNVLLHQIDVLEDPAIRNVIVLQTVLQEVRNRSAPVYKRIRDMTNNQEKHF
YTFTNEHHRETYVEQLQGENSNDRNDRAIRVAAKWYNEHLKNMSAENRLQVIFITNDRKN
KEKAIEEGIPAFTCEEYIKSLTANPELIDRLACLSEEGNEIESGKTIFSEHLPLSKLQQG
IKSGTYLQGTFRASRENYLEATVWVHSDDEDNKEILLQGLKNLNRAIHEDIVAVELLPKH
QWVAPSSVVLQDEGQNEDDIEKEEERECILKTAVNEKMLKPTGRVVGIIKRNWRPYCGML
SKSDIKESRRHLFTPADKRIPRIRIETRQASALEGRRIIVAVDGWPRNSRYPNGHFVKNL
GEVGDKETETEVLLLEHDVPHQAFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDP
PGCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMV
PELLSSNLCSLRSNVDRLAFSCIWEMTHNAEILKTRFTKSVINSKASLTYAEAQMRIDSA
AMNDNITTSLRGLNKLAKILKKGRIEKGALTLSSPEVRFHMDSETHDPIDLQTKELRETN
SMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVKAAKSKNLEIKTDTAKA
LADSLDRADSPIFPYLNTLLRILATRCMMQAVYFCSGMDNDFHHYGLASPIYTHFTSPIR
RYADIIVHRLLAVAIGADCTYPELTDKHKLADLCKNLNFRHKMAQYAQRASVAFHTQLFF
KSKGIVSEEAYILFVRKNAIVVLIPKYGLEGTVFFEEKDKPKPRLIYDDEIPSLKIEDTV
FHVFDKVKVKIMLDSSNLQHQKIRMSLVEPQIPGISVSADTSNMDINEPERKKKKLQK
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagtccaagactttcttgaaaaagacgcgggcgggtggcgtgatgaagattgtg
cgcgagcactacctgcgggatgacataggttgcggtgcgtcggggtgcgcggcgtgcgac
ggagcgcacgagggacctgtcctcgagctgcaacccctggaccgggccagcagcctctgc
ccgcagccacactacttgctgccggacaccaacgtgctgctccaccagattgatgtcctt
gaggaccctgccatcaggaatgtcatcgtgctacagacagttctccaagaagtgagaaat
aggagtgctccggtatacaaacgaatccgagatatgactaataaccaggagaagcatttc
tacacatttactaatgagcaccatagagaaacttacgtagaacaattacagggagaaaat
tctaatgacaggaatgatagagccatccgagtagctgcaaaatggtacaatgaacatttg
aagaatatgtcagcagagaatcggctgcaagttatcttcataaccaatgacaggaaaaac
aaagagaaagccatagaagaagggataccagcgttcacttgtgaagaatacataaaaagc
ctaactgctaatcctgaactcatagatcgtcttgcttgcttgtctgaagaagggaatgaa
atagaaagtggaaaaacaatattttcagagcatcttccgttaagtaagctacaacagggc
atcaaatctggcacataccttcaagggacatttcgagccagcagggaaaattacttagaa
gctacagtatgggtccatagcgatgacgaagacaataaagagatactcttacaaggactt
aaaaatttaaaccgagctattcatgaagatattgtggctgtggagcttcttcccaagcat
cagtgggtagcaccatcttctgtggttttacaagatgaaggtcaaaatgaagatgatata
gagaaggaagaggagagagaatgcattcttaagactgctgtaaatgaaaaaatgttaaag
cctacaggtagagttgttgggataataaaaaggaactggagaccatattgtggcatgctt
tccaagtctgatattaaggagtcaagaagacatctctttactcctgctgataagagaatc
cctagaattcggatagaaaccagacaggcctctgcattagaaggacggagaattattgtt
gctgttgatggttggccgagaaattccagatatccaaatggacacttcgtgaaaaattta
ggtgaagtcggagacaaagagactgaaacagaagttttgttacttgagcatgatgttccc
catcaggctttttcacaggctgttcttagctttctaccaaagatgccctggagcatcact
gagaaggacatgaaaaaccgagaagacctgagacatctgtgtgtctgtagcgtggacccc
ccaggatgtactgatatagatgatgctctccattgtagagaacttgaaaatggaaatttg
gaggttggtgttcatattgctgatgttagccattttattaggccaggaaatgctttggat
caagagtcagctagaaggggaacaactgtatatctttgtgaaaagaggattgacatggtt
ccagagttgcttagctctaacttatgttccctgagatctaatgttgacaggttggcattt
tcatgtatttgggaaatgactcacaatgctgaaatcttaaaaaccaggtttaccaaaagt
gtcattaattctaaggcttcccttacatatgctgaagctcagatgagaattgattcagca
gctatgaacgataatattactactagtctccgtggactaaataaactagctaaaattttg
aaaaaaggaagaattgaaaaaggggctttgactctttcttctccagaagttcgattccac
atggacagtgaaactcatgatcctatagatctgcagaccaaggaactcagagaaacaaac
tccatggtggaagaatttatgttacttgccaatatctctgttgcaaaaaaaattcatgaa
gaattttctgaacatgctctgcttcgaaaacatcctgctcctcctccatcaaattatgaa
attcttgttaaggcagctaaatccaagaatttggaaattaaaactgatacagccaaggct
ttagctgactctttggaccgggcagattcacctattttcccttatctaaacaccctgtta
agaatattagcaactcgctgtatgatgcaagctgtgtacttctgctctggaatggataat
gattttcatcactatggcttagcatccccaatatacacacattttacttcacccatccga
agatacgcagacatcattgttcatcgcttgttggctgtggctattggagctgactgtact
tatccagagttgactgacaaacacaagcttgcagatttatgtaaaaatctcaatttccgg
cacaaaatggctcagtacgctcagcgtgcatctgtggcttttcatactcagttatttttc
aaaagcaaaggaatagtaagtgaagaagcttatattctatttgtaaggaagaatgctatt
gtggtattaatcccaaagtatggtttagaaggtacagtattttttgaagaaaaggacaaa
ccaaagccacggcttatatatgatgatgagataccatcacttaaaatagaagatacagta
tttcatgtatttgataaagttaaagtgaaaatcatgttagactcatccaatcttcagcat
cagaaaatccgaatgtccctggtagaaccacagataccaggaataagtgtttctgctgat
acttcaaacatggacattaatgaaccagagagaaagaaaaagaagcttcaaaaatag
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