KEGG   Bubalus kerabau (carabao): 129625781
Entry
129625781         CDS       T11435                                 
Symbol
VAPB
Name
(RefSeq) vesicle-associated membrane protein-associated protein B/C
  KO
K10707  vesicle-associated membrane protein-associated protein B
Organism
bke  Bubalus kerabau (carabao)
Pathway
bke04979  Cholesterol metabolism
bke05014  Amyotrophic lateral sclerosis
bke05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:bke00001]
 09150 Organismal Systems
  09154 Digestive system
   04979 Cholesterol metabolism
    129625781 (VAPB)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    129625781 (VAPB)
   05022 Pathways of neurodegeneration - multiple diseases
    129625781 (VAPB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bke04131]
    129625781 (VAPB)
Membrane trafficking [BR:bke04131]
 Autophagy
  ER-phagy
   Other ER-phagy associated proteins
    129625781 (VAPB)
  Other autophagy associated proteins
   ER-mitochondria tethering complex
    129625781 (VAPB)
SSDB
Motif
Pfam: Motile_Sperm Kazrin Ig_CFAP65_7th LRRFIP ZapB Com_YlbF Cep192_D3 ATP-synt_G Cep192_D6 bZIP_1 Ig_CFAP65_4th GIT_CC GAT LcrG
Other DBs
NCBI-GeneID: 129625781
NCBI-ProteinID: XP_055400590
LinkDB
Position
13:complement(58530062..58577147)
AA seq 243 aa
MAKVEQVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGI
IDAGASINVSVMLQPFDYDPNEKSKHKFMVQSMFAPTDTSDMEAVWKEAKPEDLMDSKLR
CVFELPAENDKPHDVEINKIIPTTASKTETPTVSKALSSSLDDTEVKKVMEECKRLQSEV
QRLREENKQFKEEDGLRMRKTAQSNSPAPASAVAGKEEGLSTRLLALVVLFFIVGVIIGK
IAL
NT seq 732 nt   +upstreamnt  +downstreamnt
atggcgaaggtggagcaggtcctgagcctcgagccgcagcacgagctcaaattccgaggt
cctttcaccgatgttgtcaccaccaacctgaagcttggcaacccgacagatcgaaatgtg
tgttttaaagtgaagaccacggcaccacgtaggtactgcgtgaggcccaacagtgggatc
attgatgcaggggcctcgattaacgtatctgtgatgttacagcctttcgattatgatccc
aatgagaaaagtaaacacaagtttatggttcagtctatgtttgctccaactgacacttct
gatatggaagcagtatggaaggaggcaaaaccggaagaccttatggattcaaaacttaga
tgtgtgtttgaattgccagcagaaaatgataaaccacatgatgtagaaataaataaaatt
atacccacaactgcatcaaagacagaaacaccaacggtgtctaaagctctgagttcctcc
ttggatgacactgaagttaagaaggtgatggaagagtgtaagaggctgcagagcgaagtc
cagaggctgcgggaggagaacaagcagttcaaggaggaagatggccttcggatgaggaag
acagcacagagcaacagccccgctcccgcgtcagccgtggctgggaaggaggagggcctg
agcacccggctgctggcgctcgtcgtcctcttcttcatcgttggcgtgatcatagggaag
atcgccttgtag

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