Bubalus kerabau (carabao): 129625785
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Entry
129625785 CDS
T11435
Symbol
ATG4D
Name
(RefSeq) cysteine protease ATG4D
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
bke Bubalus kerabau (carabao)
Pathway
bke04136
Autophagy - other
bke04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129625785 (ATG4D)
04136 Autophagy - other
129625785 (ATG4D)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bke01002
]
129625785 (ATG4D)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bke04131
]
129625785 (ATG4D)
03029 Mitochondrial biogenesis [BR:
bke03029
]
129625785 (ATG4D)
Peptidases and inhibitors [BR:
bke01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
129625785 (ATG4D)
Membrane trafficking [BR:
bke04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
129625785 (ATG4D)
Mitochondrial biogenesis [BR:
bke03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
129625785 (ATG4D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
129625785
NCBI-ProteinID:
XP_055400606
LinkDB
All DBs
Position
1:183680365..183689037
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AA seq
472 aa
AA seq
DB search
MNSVSPAAAQYRSGSPEDARRPEGRRPRGPRTPDPNSLGPSGASGPALASPGTGPGEPDE
VDKFKAKFLTAWNNVKYGWAVKSRTSFSKISSVHLCGRRYRFEGEGDIQRFQRDFVSRLW
LTYRRDFPPLAGGSLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWTWCQGAGLGPTEPPG
LGSPSRRRGPARWLPPRWAQAPELEQERRHRQIVSWFADHPRAPFGLHRLVELGQGSGKK
AGDWYGPSLVAHILRKAVESCSEVTRLVVYVSQDCTVYKADVARLVARPDPTAEWKSVVI
LVPVRLGGETLNPVYVPCVKELLRSELCLGIMGGKPRHSLYFIGYQDDFLLYLDPHYCQP
TVDVSQADFPLESFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSAT
ERYPMFTLVEGHAQDHSLDDLCSPPSQQTLRIPRSGRLLKAKRPSSEDFVFL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtgtcgccggccgccgctcagtaccggagcgggagtccggaggacgcgcgc
cgcccggagggccgcaggccgcggggaccccgaaccccggaccccaacagcctggggccc
tccggagctagcggccccgctcttgcatcgcccgggaccggccccggagagccggacgaa
gtggacaagtttaaggcgaagttcctgaccgcttggaacaacgtcaagtacggttgggca
gtcaaaagccggaccagctttagcaagatctccagtgtccatctctgtggccgccgctac
cgcttcgagggcgagggtgacatccagcgtttccagcgggactttgtatctcgcctatgg
ctcacataccgccgggacttcccacccctcgcgggaggcagcctgacctcagactgtggc
tgggggtgcatgttacgaagtgggcagatgatgctggctcagggccttctgcttcatttc
ctgcccagagactggacgtggtgccagggcgcaggtctgggccccactgagcctccaggg
ttgggctctcccagccgacgccgggggcccgcgcggtggctgcctccgcgctgggcccag
gcccctgagctggagcaggagcgccggcaccggcagatcgtgtcctggttcgctgaccac
ccccgggcccccttcggcctacaccggctggtggagctggggcagggctcaggcaagaag
gcaggcgactggtatgggccgtctctggtggcacacatactcaggaaagcggtggagagc
tgctcggaggtcacccgcctggtggtgtacgtctctcaggactgcacagtatacaaggcg
gatgtggcacgcctggtggcccggccagaccccacggctgaatggaagtccgtggtcatc
ctggtaccagtgcggcttggtggagaaactctcaaccccgtgtacgtgccctgcgtgaag
gagctccttcgttcagagctgtgcctgggtattatgggcggcaagccccgccactcgctg
tacttcatcggctaccaggatgacttcctgctctacctggacccgcactactgccagccc
accgtggatgtcagccaggccgacttcccactggagtccttccactgcacctcaccccgc
aagatggcctttgccaagatggacccgagctgtaccgtgggcttctatgctggagacaga
aaggagtttgagacgctctgctcagagctgaccagggtcctcagctcctcctcagccaca
gaacgataccccatgttcaccctggtcgagggccacgctcaggaccacagcctggatgac
ctctgctccccgccctcccagcagacactgcggatccctcgcagtggccggctcctcaag
gctaaacgcccaagctctgaggactttgtgtttttataa
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