Bubalus kerabau (carabao): 129625786
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Entry
129625786 CDS
T11435
Symbol
CTCFL
Name
(RefSeq) transcriptional repressor CTCFL
KO
K23195
transcriptional repressor CTCF
Organism
bke Bubalus kerabau (carabao)
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bke03000
]
129625786 (CTCFL)
03036 Chromosome and associated proteins [BR:
bke03036
]
129625786 (CTCFL)
Transcription factors [BR:
bke03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
129625786 (CTCFL)
Chromosome and associated proteins [BR:
bke03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129625786 (CTCFL)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_16
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-C2H2_ZN142
zf-C2H2_15
Zn_ribbon_8
DUF7479
zf-C2H2_REST
Motif
Other DBs
NCBI-GeneID:
129625786
NCBI-ProteinID:
XP_055400605
LinkDB
All DBs
Position
13
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AA seq
659 aa
AA seq
DB search
MAGAELCVPPEQFTQIKEPELIPDRALEEEEEEENDNDGVCRVKEQSGSAGLAVESAQGP
LQTTILEEVPELVLAAPEESERHILTLQTVHFPSEEAELQDLSWLDPQQEDEMQVTVHQA
GSGVQSLVWLEEAAQQSLHQCVLNVQEEVYSLQQMEVMQFQLLEENVTGAVEDCKSAVSL
EESTGSIKLQKGQEEEQLLTEGGFTEKAEEQFFLVEARPGDEGRDEIVLTFSNLNMEEQK
EKPELSQAHLEKPSTRKNQNKAKEVKRTFHCNFCKFTSSRISSVNRHMKIHSTEKPHVCH
LCLKAFRTVTLLRNHVNTHTGTRPHKCGDCDMAFVTSGELIRHRRYKHTHEKPFKCSMCK
YASVEASKLKRHIRSHTGERPFQCSLCSYASKDTYKLKRHMRTHSGEKPYECHICHARFT
QSGTMKMHILQKHSENVPKYPCPHCTTVIARKSDLRVHLRKLHTYEAAEMKCRYCPAVFH
DRYTLIQHQKTHKNEKRFKCDYCSYACKQERHMTVHIRTHTGEKPFVCLACNKCFRQQQL
LNVHFKKYHDANFVPTVYECPKCGKGFSRWSNMHRHSKKCNSGQEKPTPVEKERAVKRKP
ASPREPAKEDEATAKEVSLVSEELYPGEMVPIDFLEAKTGSEDLEQNLTCDMILALMDK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggctgagctctgtgtcccccctgagcagttcacccaaatcaaagaaccagag
ttgataccagacagggccctggaggaggaggaagaagaggaaaatgacaatgacggggtg
tgccgagtaaaggaacagtcgggctctgcgggtttggcggtggagagtgctcagggaccc
ctccagaccacgatcctggaagaggtgccagagctggtgctggctgccccggaggagagc
gagaggcacatcctgaccctgcagaccgtgcacttcccctcggaagaggctgaactgcag
gacctcagctggctggatccccagcaggaggacgagatgcaggtgacggtgcaccaggcc
ggtagtggggtgcagtcgctggtgtggctcgaggaggcagcccagcagagcctgcaccag
tgtgtcctcaatgtccaggaggaggtatactcgctgcagcagatggaggtgatgcaattt
cagcttctggaggagaatgtgactggggccgttgaagactgtaagtctgcagtgagcctg
gaagaaagcactggatccataaagctccagaaaggtcaggaagaggaacagctgctgact
gaaggtggattcactgaaaaagcagaagagcagttttttcttgtggaagcaaggccagga
gatgaaggaagagatgaaattgttctgacattttcaaacttaaatatggaagaacaaaaa
gaaaaacctgaactgagtcaagcacaccttgaaaaacccagcactaggaaaaatcaaaac
aaggcaaaggaagtaaaacgaaccttccactgcaacttctgcaagttcacgtcttctaga
atttcgagtgtcaatcgtcatatgaaaattcacagcactgaaaagccccacgtgtgtcac
ctgtgcctgaaggctttccgtacagtcaccctccttcggaatcatgtcaacacccataca
ggaaccagaccccacaagtgtggtgattgtgacatggcatttgtcaccagtggagaactc
atccggcatagacgttataaacacactcacgagaaaccctttaaatgctccatgtgcaag
tacgctagtgtagaagcgagcaagttgaagcgccacatccgctcgcacacgggtgagcgc
ccctttcagtgctccctctgcagctacgccagcaaagacacctacaagctgaagcggcac
atgagaacacattcaggtgaaaagccctacgagtgccacatctgccatgcccgcttcacc
cagagcgggaccatgaagatgcacatcctgcagaagcacagcgagaacgtccccaaatac
ccgtgcccgcactgcaccaccgtcatcgccaggaagagcgacctgcgtgtccatttgcgc
aaactgcacacatacgaagctgcagagatgaagtgccgttactgccctgctgtgttccac
gatcgctacactctgatccagcaccagaaaactcacaaaaatgagaagagattcaagtgc
gactactgcagctacgcctgcaagcaggaacgtcatatgacagttcacatacgtacccat
accggagagaagccgtttgtctgtctcgcctgcaataaatgtttccgacagcagcagctt
ctaaatgtgcacttcaagaaataccacgatgccaatttcgtcccgactgtttacgaatgc
cccaagtgtggcaaaggtttttcccgctggagcaacatgcacagacactccaaaaaatgt
aactctgggcaggaaaagccgacccccgtggaaaaagaaagagcagtgaagaggaagccc
gccagcccaagagagccagccaaggaagacgaagctacagccaaggaggtatccctggtg
agtgaagagctgtacccaggagagatggtgcccattgacttcttagaagccaagaccgga
agtgaggacctggagcagaacctgacctgtgacatgatcctggccttgatggataagtga
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