Bubalus kerabau (carabao): 129627630
Help
Entry
129627630 CDS
T11435
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
bke Bubalus kerabau (carabao)
Pathway
bke04136
Autophagy - other
bke04140
Autophagy - animal
bke04211
Longevity regulating pathway
bke05010
Alzheimer disease
bke05014
Amyotrophic lateral sclerosis
bke05016
Huntington disease
bke05017
Spinocerebellar ataxia
bke05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129627630 (ATG13)
04136 Autophagy - other
129627630 (ATG13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
129627630 (ATG13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
129627630 (ATG13)
05014 Amyotrophic lateral sclerosis
129627630 (ATG13)
05016 Huntington disease
129627630 (ATG13)
05017 Spinocerebellar ataxia
129627630 (ATG13)
05022 Pathways of neurodegeneration - multiple diseases
129627630 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bke04131
]
129627630 (ATG13)
03029 Mitochondrial biogenesis [BR:
bke03029
]
129627630 (ATG13)
Membrane trafficking [BR:
bke04131
]
Autophagy
Autophagosome formation proteins
ULK complex
129627630 (ATG13)
Atg1 complex
129627630 (ATG13)
Mitochondrial biogenesis [BR:
bke03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
129627630 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129627630
NCBI-ProteinID:
XP_055402980
LinkDB
All DBs
Position
15:77322828..77364965
Genome browser
AA seq
550 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYAVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGDVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRHFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
ACPSVEDSQEVCATSFSTSPPSQCVFTVTKALFQTPTPVVTDTLRVPTAGLAFSHQLSSS
RLSYQPAALGVGSADLAYPVVFAAGLNATHPHQLMVPGKEGGVPLGPSQPAHAAQADQER
LATYTPSDGAHCAATPSSSEDAETVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTL
TSLDIPFAMFAPKNLELEEADPMVNPPDSPETTSPLQGSLHSDGSSGGSSGHTQDDFVMI
DFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSLDIGAQSMAEDLDSLPEKLAAHEKNVR
EFDAFVETLQ
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatcttaattcccaggacagaaaggacctggacaagttcattaagtttttt
gccctcaagactgtccaagtgattgtccaggctcgactgggagagaagatttgtactcgt
tcgtcttcttccccaacgggttcagactggttcaatttagcaatcaaagacatcccagag
gttacacatgaagcaaagaaggccctggcagggcagctgcctgctgttgggaggtctatg
tgtgtggagatctcactcaagacttctgagggagattccatggagctagaaatctggtgt
ctggaaatgaatgaaaagtgtgataaagaaatcaaagtttcctatgctgtgtacaacaga
ttgtcgttgctgctgaagtctctgcttgctataactagggtgacaccagcttatagactc
tccagaaagcaagggcatgaatatgtcatcttatacagaatatattttggggacgttcag
ctgaatggcttaggggaaggtttccagacagttcgtgttgggacagtgggtacccctgtg
ggcaccatcactctttcctgtgcttacaggattaacttggcattcatgtccaccaggcac
tttgagaggaccccacctatcatgggcattattattgatcactttgtggaccgtccctat
cccagctcctcgcccatgcacccctgcaattacagaaccgccggcgaggacactggagta
gcgtgtccttctgtggaagactctcaggaagtgtgcgccacctccttttccacctcgcct
ccctcccagtgtgtgtttacggtcacaaaggcactttttcagacccctactcctgtggtg
acggacaccctgagggtccccacggcaggactggccttttcccatcaactctccagctct
cgcctttcctatcagcctgctgccctgggcgttggatctgctgacctggcttatccagta
gtgtttgctgctggcttaaacgccacacaccctcaccagctaatggtccccgggaaggaa
ggtggggtaccccttggtcccagccagcctgcccatgctgcccaggctgaccaggagaga
ctggcaacctacaccccttctgatggggcccactgcgctgccacgccgtccagcagtgag
gatgctgaaactgtatcaaacagcagcgagggacgggcctccccccacgatgtcttggag
accatctttgtccggaaagtgggggcttttgtcaacaagcccatcaaccaggtgaccctg
accagtttggacataccctttgccatgtttgctcccaagaacctggagctggaggaggca
gatcccatggtgaatccgccagattccccagagactacatctcctctccagggcagcctg
cactctgatggctccagcgggggcagcagcggccatacccaggacgacttcgtcatgatc
gactttaaaccagctttttctaaagacgacatccttccgatggacttggggaccttctat
cgtgaatttcagaacccgcctcagctgagcagcctctccctcgacatcggggcccagtcc
atggccgaggacttggactcactcccagagaagctggctgcgcacgagaagaatgtccga
gaatttgatgcctttgtagaaaccctgcagtaa
DBGET
integrated database retrieval system
