KEGG   Bubalus kerabau (carabao): 129628249
Entry
129628249         CDS       T11435                                 
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72 like protein 5-like
  KO
K15544  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
Organism
bke  Bubalus kerabau (carabao)
Pathway
bke03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:bke00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    129628249
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bke03021]
    129628249
   03019 Messenger RNA biogenesis [BR:bke03019]
    129628249
Enzymes [BR:bke01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     129628249
Transcription machinery [BR:bke03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     129628249
Messenger RNA biogenesis [BR:bke03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     129628249
SSDB
Motif
Pfam: Ssu72
Other DBs
NCBI-GeneID: 129628249
NCBI-ProteinID: XP_055403640
LinkDB
Position
15:51487907..51489288
AA seq 194 aa
MSSSTLRVAVVCMSNMSRSMEAHSILKKKGFNVRSFGVGSRVTLPGLAPNLPVVYDFSTT
YEQMRKDLLCKNRMHYRSNGVLQILGRNERIKPGPERFQECRDPFDAVFTCTERVYKVVV
KNLCAREQKTWQPVYAINVEIEDTMEAATLGALIICKLCQGLQQEDDMQSSLPKLFQGVK
KKTGKSFLHTICFY
NT seq 585 nt   +upstreamnt  +downstreamnt
atgtcatcctccacactcagggtggctgtggtctgtatgagcaacatgagcaggagcatg
gaagcccacagcatcctcaagaagaaaggattcaacgtcaggtcttttggagtgggatcc
cgtgtgacactgccaggactggcacccaacctccctgtggtatatgatttctccaccaca
tatgagcagatgcgcaaggaccttctctgcaaaaacagaatgcactacaggagcaatggg
gtgttacagattttggggagaaatgagagaatcaaacctggccctgaaagatttcaagag
tgcagagatcccttcgatgccgtcttcacctgtactgagagagtgtataaagtggtggtg
aaaaatctgtgtgctagagaacagaagacctggcagcctgtgtatgcgatcaacgtggaa
atagaggacaccatggaggcagccacacttggagctctgatcatctgtaagctctgccag
ggtctccagcaggaggacgatatgcaaagcagtctgcctaagctgttccagggagtgaag
aagaaaacaggcaagagctttctgcacactatctgcttctactga

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