Bubalus kerabau (carabao): 129629637
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Entry
129629637 CDS
T11435
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X1
KO
K23625
ataxin-2
Organism
bke Bubalus kerabau (carabao)
Pathway
bke05014
Amyotrophic lateral sclerosis
bke05017
Spinocerebellar ataxia
bke05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
129629637 (ATXN2)
05017 Spinocerebellar ataxia
129629637 (ATXN2)
05022 Pathways of neurodegeneration - multiple diseases
129629637 (ATXN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bke03019
]
129629637 (ATXN2)
Messenger RNA biogenesis [BR:
bke03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
129629637 (ATXN2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
Motif
Other DBs
NCBI-GeneID:
129629637
NCBI-ProteinID:
XP_055405714
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All DBs
Position
16:complement(59285172..59387153)
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AA seq
1144 aa
AA seq
DB search
MSLKPQQQQQQQQQPQPQPAAANARKPGGGGGGGLLTSPAAAPSSVSSSSAAASSSSSSV
AAASTGGGRPGLGRGRNSSKGLPQSTISFDGIYANMRMVHILTSVVGSKCEVQVKNGGIY
EGVFKTYSPKCDLVLDAAHEKSTESSSGPKREEIMESILFKCSDFVVVQFKDMDSSYARR
DAFTDSAISAKVNGEHKEKDLEPWDAGELTTNDELEALENDVSNGWDPNDMFRYNEENYG
VVSTYDSSLSSYTVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEEK
YTAVQRNSSEREGHNINTRENKYIPPGQRNREVISWGSGRQNSPRMGQPGSGSMPSRSTS
HTSDFNPNSGSDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPS
RPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEFV
SHTPPSEAAAPPTARTSPAGGTWSSVVSGVPRLSPKTHRPRSPRQNSIGNTPSGPVLASP
QAGIIPAEAVAMPVPAASPTPASPASNRAVTPSLEAKDSRLQDQRQNSPAGNKENMKPSE
TSSSFSKAENKGISPIVSEHRKQIDDLKKFKNDFRLQPSSTSESMDQLLNKNREGEKSRD
LIKDKIEPNAKDSFIENSSNCTSGSSKPSSPSISPSVLSNTEHKRGPEVTSQGVQTSSPG
CKQEKEDKEEKKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGH
QQPTPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAGKVPNMPQQRQD
QHHQSTMMHPASAAGPPIVATPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYSPV
IQGNARMMAPPTHAQPGLVSSSATQYGAHEQTHAMYACPKLPYNKETSPSFYFAISTGSL
AQQYAHPNATLHPHPPHPQPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALHLASPQQ
QSAIYHAGLAPTPPSMTPASNTQSPQNSFPAAQQTVFTIHPSHVQPAYTNPPHMAHVPQA
HVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSVQAHH
QQQL
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgaagcctcagcagcaacagcagcagcagcagcagccgcagccgcagcccgcg
gccgccaatgcccgcaagcctggcggcggcggcggcggcggccttctcacgtcgccagcc
gccgcgccgtcctcagtctcgtcgtcctcggccgcggcttcctcctcctcctcctcagtg
gcggcggctagcacaggcggcgggcggccgggcctgggcagaggccgaaacagtagcaaa
ggactgcctcaatccacgatttcttttgatggaatctatgcaaatatgaggatggttcat
attcttacatcagttgttggatccaaatgtgaagtacaagtgaaaaacggaggtatatat
gaaggagtttttaaaacatacagtcctaagtgtgatctggtacttgatgctgcacatgag
aaaagtacagaatccagttcggggccaaaacgtgaagaaataatggagagtattttgttc
aagtgttcagactttgttgtggtgcagtttaaagatatggactccagttatgcaagaaga
gatgcttttactgactctgctatcagtgctaaagtgaatggtgaacacaaagaaaaggac
ctggagccttgggatgcaggtgaactcactaccaatgacgaactggaggctttggaaaat
gatgtttctaatggatgggatcccaacgatatgtttcgatataatgaagaaaattatggt
gtagtgtctacatacgatagcagtctgtcttcatatacggtgcccttagaaagggataac
tcagaagaatttttaaaacgagaagcaagggcaaaccagttagcagaagaaattgaatca
agtgcccagtataaagcccgggtggccctggaaaatgatgataggagtgaagaagaaaaa
tacacagcagttcagagaaattccagtgaacgtgagggccacaacataaacactagggaa
aataaatatattcctcctggacaaagaaatagagaagtcatatcctggggaagtgggcgt
cagaattcaccacgtatgggccagcctggatcgggctccatgccatcaagatccacctct
cacacttcagatttcaacccgaattctggttcagaccaaagagtagttaatggaggtgtt
ccctggccatcgccttgcccatctccttcctctcgcccaccttctcgctaccagtcaggt
cccaactctcttccacctcgggcagccacccctacacggccgccctccaggcccccctcg
cggccatccagacccccgtctcacccctctgctcatggttctccagctcctgtctctact
atgcctaaacgcatgtcttcagaagggcctccaaggatgtccccaaaggcccagcgacac
cctcgaaatcacagagtttctgctggaaggggttccatttccagtggcctagaatttgta
tcccataccccaccaagtgaagcagctgctcctccaacagcaaggaccagtcctgcaggg
ggcacatggtcatccgtggtcagcggagttccaagattatcccctaaaacacacagaccc
aggtctcccagacagaatagtattggaaatactcctagtgggccagttcttgcttctccc
caagctggtattatcccagctgaagctgttgctatgcctgtaccagctgcatctcctaca
cctgccagtcctgcatccaacagagctgttaccccatctcttgaggctaaagattccagg
cttcaagatcagaggcaaaactctcctgcagggaataaagaaaatatgaagcccagtgag
acatcatccagcttctcaaaagctgaaaataaaggtatatcaccaattgtttctgaacat
agaaaacagattgatgatttaaagaaatttaagaatgattttaggttacagccaagttct
acttctgaatctatggatcagctgctaaacaaaaatagagagggagaaaaatcaagagat
ttgatcaaagacaaaattgaaccaaatgctaaggattctttcattgaaaatagcagcaac
tgcaccagtggcagcagcaagccgagcagccccagcatttccccttcagtcctcagtaac
acggagcacaagaggggacctgaggtcacatcccaaggggttcagacttccagtccagga
tgtaaacaagagaaagaagataaagaggagaagaaagacgcagctgagcaagtgaggaaa
tcaacgttgaatcccaatgcaaaggagttcaaccctcgttctttttctcagccaaagcct
tctaccaccccaacttcgcctcgtcctcaagcacaacctagcccatctatggtgggtcat
cagcagccaactccagtttatactcagcctgtttgttttgcaccaaatatgatgtatccg
gtccctgtgagcccgggcgtgcaacctctgtatcctatacctatgacgcccatgccagtc
aatcaagccaagacatatagagcaggtaaagtaccaaatatgccgcaacaacggcaagac
caacaccatcagagtaccatgatgcacccagcctcagcagcaggcccaccaattgtggcc
accccaccagcttattccacacagtatgtcgcctacagtcctcagcagtttccaaatcag
cctcttgttcagcatgtgccacattatcagtctcagcatcctcatgtctatagtcctgta
atacagggtaatgctagaatgatggcaccaccaacacatgcccagcctggtttagtgtcc
tcttcagcgactcagtacggggctcatgagcagacacatgcgatgtatgcatgtcccaaa
ttaccatacaacaaggagacaagcccttctttctactttgccatttccactggctccctt
gctcagcagtatgcgcaccctaatgctaccctgcacccacatcctccacatcctcagcct
tcagctacgcccaccggacagcagcaaagccaacatggtgggagccatcctgcacccagt
cctgttcagcaccatcagcaccaggccgctcaggctctccatctggccagtccacagcag
cagtctgccatttaccatgcggggcttgcgccaaccccaccttccatgacacctgcctcc
aatacacagtctccacagaatagtttcccagcagcacagcagaccgtctttaccattcat
ccttctcatgttcagccggcttacaccaatccaccccacatggcccatgtacctcaggct
catgtacagtcaggaatggttccttctcatccaactgcccatgcgccaatgatgctaatg
acgacacagccacccggcggtccccaggccgccctcgctcaaagtgcactacagcccatt
ccagtctcgacaacagcgcatttcccttatatgacgcacccttcagtacaagcccaccac
caacagcagttgtaa
DBGET
integrated database retrieval system
