Bubalus kerabau (carabao): 129629741
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Entry
129629741 CDS
T11435
Name
(RefSeq) protocadherin alpha-6-like
KO
K16493
protocadherin alpha
Organism
bke Bubalus kerabau (carabao)
Pathway
bke04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
129629741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bke03036
]
129629741
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bke04515
]
129629741
Chromosome and associated proteins [BR:
bke03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
129629741
Cell adhesion molecules [BR:
bke04515
]
Cadherins
Protocadherins
129629741
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_FAT4_N
Ig_Cad99C_N
Ig_CLSTN
Cadherin_C_2
Ig_BT4661_3rd
Motif
Other DBs
NCBI-GeneID:
129629741
NCBI-ProteinID:
XP_055405941
LinkDB
All DBs
Position
1:220776363..220778807
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AA seq
814 aa
AA seq
DB search
MEINQQVFEMVITSEGRLRSRCLMLSLLLLAAWEAGSGQVHYSVPEEAKHGTFVGRIAQD
LGLELAELVPRLFRVASKGRGDLLEVNLQNGILFVNSRIDREELCGRSVECSIHLEVIVD
RPLQVFHVEVEVKDINDNPPVFPVKEQRVLISESRLPDSLFPLEGASDADVGSNSILTYR
LTSNENFALDVKTNSDDSTQIGLMLRKSLDREEVPEHNLLLMATDQGKPELTGTVQLLIT
VLDVNDNAPSFGQSEYEVKIFENSDNGTIVIRVNASDRDEGANGEISYSFNNLVPATVSN
QFRIDANTGEIVIQGNLDFENMNLYKIRIEATDKGHPPMAGHCTVLVKVLDKNDNVPQIA
LTSLSLPVREDAQLGTVIALISVSDLDSGPNGQVTCSLTPYVPFKLVSTFKNYYSLVLDS
PVDRENVANYEVVVTARDGGSPSLSATASMSVEVADVNDNAPAFAQPEYTVFVKENNPPG
CHIFTVSARDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYALQPLDHEELELL
QFQVSARDAGVPPLGSNVTLQVFVLDENDNAPALLPPGSGGGPHAVSQVVSRSVGTGHVV
AKVRAVDSDSGYNAWLSYELQPAAGGASSPFRVGLYTGEISTTRALDEADAPRQRLLVLV
KDHGEPALTATATVLLSLEDSGQAPKASSRALSGEAGTETAFVDVNVYLIIAICAVSSLL
VLTLLLYMALRCSAPPSEGACGPVKPRLVCSSAVGSWSFSQERRQRVCSGQGPPKTDLMA
FSPSLPACPVVADMGEHQDLKDDCLSKVSLSFHN
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggaaataaaccagcaagtatttgaaatggttattacatctgaaggtcgactgagatcc
cggtgtttgatgctctcgcttctgcttcttgcagcctgggaagcagggagcggccaggtc
cactactcggtcccggaggaggccaaacacggcaccttcgtgggtcgcattgcccaggac
ctgggactggagctggcggaactggttccccgcctgtttcgggtggcatccaaaggccgc
ggggaccttctggaggtaaatctgcagaatggcattttgtttgtgaattctcggatcgac
cgggaagagctgtgcggacggagcgtggagtgcagcatccacctggaggtgatcgtggac
cggccgctgcaggtgttccatgtagaggtggaggtgaaggacattaacgacaacccgcct
gtgttcccggtaaaggaacaaagagtgttgatttccgaatctaggctgccagactctttg
tttccactagagggcgcatcggatgcagatgtggggtcaaattctattttaacctacaga
ctcacttccaacgaaaatttcgcactggatgtgaaaacaaacagtgatgacagtacacaa
attgggctcatgttaaggaaatccttggacagagaggaagtgcccgaacataacttactc
ctcatggccactgaccaaggcaaacctgagctcactggcactgttcagctgctgattact
gtactggatgtgaatgacaatgctcccagttttggacaatctgaatacgaagtaaaaatc
tttgaaaactcagataacggaacaatagttatccgagtgaatgcttctgatagggatgaa
ggagcgaatggggaaatatcatattcttttaataatcttgttccagccactgttagtaac
cagtttagaatagatgcgaatactggagaaatagttattcaagggaacttagattttgaa
aatatgaatttatacaaaatccgtattgaagcgacggacaaaggccaccctcccatggct
ggtcattgcaccgttttagtgaaagtcttggataaaaatgataacgtccctcagattgct
ttgacttccttatccttgcccgtccgagaggatgctcaattaggtactgtcatagcccta
attagcgtgtccgatctggactcaggtcccaatgggcaggtgacctgctctctgacgccc
tatgttcccttcaaactggtgtccaccttcaagaattactattcactagtgctggatagc
cccgtggaccgagaaaacgtggctaactatgaagtggttgtgactgcgagggacggaggc
tcgccttcgctgtcggcaacggccagcatgtccgtggaggtggccgacgtgaacgacaat
gctcccgcattcgcgcagcctgagtacacggtgttcgtgaaggagaacaacccgcccggc
tgccacatcttcaccgtgtcggcgcgagacgccgacgcgcaggagaacgcgctggtgtcc
tactcgctggtggagcggagggtgggcgagcgcgcgctgtcgagctacgtgtcggtgcac
gcggagagcggcaaggtgtacgcgctgcagccgctggaccacgaggagctggagctgctg
cagttccaggtgagcgcgcgcgacgcgggcgtgccgcccctgggcagcaacgtgacgctg
caggtgttcgtgctggacgagaacgacaacgcgcccgcgctgctgccgcccgggtctggc
ggaggaccccacgctgtgagccaggtggtgtcgaggtccgtgggcacgggccacgtggtg
gcaaaggtgcgcgctgtggactctgactcgggctacaacgcgtggctgtcgtacgagctg
cagccggcggcgggtggcgcaagcagcccgttccgcgtggggctgtacaccggcgagatt
agcaccacgcgcgccctggacgaggcggacgcgccgcgccagcgcctgctggtgctggtg
aaggatcacggcgagccggcgctgacggccaccgccaccgtgctgctgtcgctggaagac
agcggccaggcgcccaaggcctcttcgcgggcgttgtctggtgaagctggcacagaaacg
gcgttcgtggatgtgaatgtgtacctgatcatcgccatctgcgcggtgtccagcctgttg
gtgcttacactgctgctgtacatggcgctgcggtgctcggcgccgcccagcgagggcgcg
tgcgggccggtgaagcccaggctggtgtgctccagcgcggtggggagctggtctttctct
caggagaggcggcagagggtgtgctctgggcaggggccgcccaagaccgacctcatggcc
ttcagtcccagcctaccagcctgtccagtagtggcggatatgggcgagcatcaggattta
aaggatgactgtctttccaaagtaagtctgagttttcataattaa
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