KEGG   Bubalus kerabau (carabao): 129629890
Entry
129629890         CDS       T11435                                 
Name
(RefSeq) protocadherin alpha-9-like
  KO
K16493  protocadherin alpha
Organism
bke  Bubalus kerabau (carabao)
Pathway
bke04519  Cadherin signaling
Brite
KEGG Orthology (KO) [BR:bke00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    129629890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bke03036]
    129629890
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:bke04515]
    129629890
Chromosome and associated proteins [BR:bke03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    129629890
Cell adhesion molecules [BR:bke04515]
 Cadherins
  Protocadherins
   129629890
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_FAT4_N Ig_Cad99C_N Sde0182_C Ig_CLSTN Cadherin_C_2 Cyanophycin_syn
Other DBs
NCBI-GeneID: 129629890
NCBI-ProteinID: XP_055406105
LinkDB
Position
1:220792700..220795195
AA seq 830 aa
MLCASQGKQGNRNLLLLFVTLAAWETGSGQVRYSVMEEAKHGTFVGHIAQDLRLELQELV
PRLFQLDSKGLGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPLQVFHVE
VEVKDINDNPPVFLGTQKNLFIAESRPLDSRFPLEGASDADIGENALLTYRLSSSEYFSL
EVPTTDQQVKPLSLVLRKPLDREESPELHLVLTATDRGKPELTGTVQLLINVLDVNDNTP
VFDRTLYAVKLAENVPNGTLVIKLNASDVDEGLNADIIYSFSSDASPDIKFKFYIDPVSG
EITVTGRIDFEERKTYKIRVEATDKGYPPLTGHCTVLVEVLDTNDNAPKLTIKTLWLPVK
EDAQLGTIIALISVIDGDEGENGQVTCSLTPHVPFKLVSTFKNYYSLVLDSALDRESVAN
YEVVVTARDGGSPPLSAKASVSVEVADVNDNAPAFPQPEYTVFVKENNSPGCHIFTVSAR
DADAQENALVSYSLVERRVGDRALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDA
GVPPLGSNVTLQVFVLDENDNAPALLPPGPGGGPSAVSQVVSRSVDAGHVVAKVRAVDAD
SGYNAWLSYELQPAAGGARSPFRVGLYTGEISTTRALDEADAPRQSLLVLVKDHGEPALT
ATATVLLSLEDSGQAPKASSRALSGAAGAETALVDVNVYLIIAICAVSSLLVLTLLLYMA
LRCSAPPSEGVCGPVKPRLVCSSAVGSWSYSQERRQRVCSGEGPPKTDLMAFSPSLPPCP
GSVANDPQASLDSSGKVGHSIFYLFIFVFHLEKYLNYLLRHIRMVFIHLS
NT seq 2493 nt   +upstreamnt  +downstreamnt
atgctgtgcgcaagtcaaggcaaacaagggaaccggaatctactactgctgtttgtcacc
ctcgcagcctgggagacagggagtggccaggttcgttattcagttatggaggaggccaaa
cacggcaccttcgtgggccacatcgcccaggacctaaggctggagctgcaagagctggtg
ccccgcttgttccagttggattccaaaggtcttggggatcttctggaggtaaatctgcag
aatggcattttgtttgtgaattctcggatcgaccgggaggagctgtgcgggcggagcgcg
gagtgcagcatccacttggaggtgatcgtggaccggccgctgcaggtgttccatgtggag
gtggaggtgaaggacattaacgacaatcctcctgtattcctggggacacaaaagaatctg
tttatcgctgaatccaggccgcttgactctcggtttccactagagggcgcctccgacgca
gatatcggggagaacgctctgttgacttacaggctgagctccagtgagtacttctctctg
gaggtaccaaccaccgaccaacaggtaaaacctctcagtcttgtgttacgcaaaccttta
gacagggaagaatctccggaacttcatttagtgctcacggccactgacagaggcaaacct
gagctgactggcaccgttcagttactcatcaatgtgctagacgtcaatgacaacactcca
gtttttgatagaacactctatgctgtgaaattagcagaaaacgtccctaatggaacgttg
gtaattaaacttaatgcctcagatgtagacgaaggcttgaatgcggatattatttattca
ttctctagtgacgcttctcctgatataaaatttaagttctacatagaccctgtaagtggg
gaaattacagttacaggacgcatcgattttgaagaaagaaaaacctacaaaatccgagta
gaggcgactgataaaggctacccacccctgactggtcactgtacagttctcgtggaagtt
ttggatactaatgacaatgctcctaagttgactatcaaaactctctggctcccggtcaaa
gaggatgcacagctggggacaatcatcgccctgatcagtgtgattgacggagatgaaggt
gaaaatggacaggtgacctgttctctgacgcctcatgtccccttcaagctagtgtccacc
ttcaagaattactattcgctggtcctggatagtgccttggatcgtgagagcgtagcgaac
tatgaagtagtggtgaccgcgagggacgggggctcacctccgttgtcggccaaggccagc
gtgtccgtggaggtggctgacgtgaacgacaacgcgcccgcgttcccgcagcccgagtac
acggtgttcgtgaaggagaacaactcgcccggctgccacatcttcacggtgtcggctcgg
gacgcggacgcgcaggagaacgcgctggtgtcctactcgctggtggagcggagggtgggc
gaccgcgcgctgtcgagctacgtgtcggtgcacgcggagagcggcaaagtgtacgcgctg
cagccgctggaccacgaggagctggagctgctgcagttccaggtgagcgcgcgcgacgcg
ggcgtgccgcccctgggcagcaacgtgacgctgcaggtgttcgtgctggacgagaacgac
aacgcgcctgcgctgctgccgcctgggccaggcggaggacccagcgcggtgagccaagtg
gtatccaggtccgtggacgcgggccacgtggtggcgaaggtgcgcgcggtggacgcggac
tcgggctacaacgcgtggctgtcgtacgagctgcagccggcggcgggtggcgcacgcagc
ccgttccgcgtggggctgtacaccggcgagatcagcaccacgcgcgccctggacgaggcg
gacgcgccgcgccagagcctgctggtgctggtgaaggaccacggcgagccggcgctgacg
gccacggccaccgtgctgctatcgctggaggacagcggccaggcgcccaaggcctcttcg
cgggcgttgtctggtgcagccggcgcagagacggcgttagtggatgtgaacgtgtacctg
atcatcgccatctgcgcggtgtccagcctgttggtgcttacactgctgctgtacatggcg
ctgcggtgctcggcgccgcccagtgaaggcgtgtgcgggccggtgaagcccaggctggtg
tgctccagcgctgtgggaagctggtcttactcgcaggagaggcgacagagggtgtgctct
ggggaggggccgcccaagaccgacctcatggccttcagccccagcctacctccgtgtcct
ggatctgtagccaatgatccacaggcttctttggactcctctggtaaggtgggtcattca
atattttatttgttcatttttgtattccatcttgaaaaatatcttaattatcttctaagg
catattagaatggttttcatccatttatcctag

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