Bubalus kerabau (carabao): 129629890
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Entry
129629890 CDS
T11435
Name
(RefSeq) protocadherin alpha-9-like
KO
K16493
protocadherin alpha
Organism
bke Bubalus kerabau (carabao)
Pathway
bke04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
129629890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bke03036
]
129629890
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bke04515
]
129629890
Chromosome and associated proteins [BR:
bke03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
129629890
Cell adhesion molecules [BR:
bke04515
]
Cadherins
Protocadherins
129629890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_FAT4_N
Ig_Cad99C_N
Sde0182_C
Ig_CLSTN
Cadherin_C_2
Cyanophycin_syn
Motif
Other DBs
NCBI-GeneID:
129629890
NCBI-ProteinID:
XP_055406105
LinkDB
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Position
1:220792700..220795195
Genome browser
AA seq
830 aa
AA seq
DB search
MLCASQGKQGNRNLLLLFVTLAAWETGSGQVRYSVMEEAKHGTFVGHIAQDLRLELQELV
PRLFQLDSKGLGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPLQVFHVE
VEVKDINDNPPVFLGTQKNLFIAESRPLDSRFPLEGASDADIGENALLTYRLSSSEYFSL
EVPTTDQQVKPLSLVLRKPLDREESPELHLVLTATDRGKPELTGTVQLLINVLDVNDNTP
VFDRTLYAVKLAENVPNGTLVIKLNASDVDEGLNADIIYSFSSDASPDIKFKFYIDPVSG
EITVTGRIDFEERKTYKIRVEATDKGYPPLTGHCTVLVEVLDTNDNAPKLTIKTLWLPVK
EDAQLGTIIALISVIDGDEGENGQVTCSLTPHVPFKLVSTFKNYYSLVLDSALDRESVAN
YEVVVTARDGGSPPLSAKASVSVEVADVNDNAPAFPQPEYTVFVKENNSPGCHIFTVSAR
DADAQENALVSYSLVERRVGDRALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDA
GVPPLGSNVTLQVFVLDENDNAPALLPPGPGGGPSAVSQVVSRSVDAGHVVAKVRAVDAD
SGYNAWLSYELQPAAGGARSPFRVGLYTGEISTTRALDEADAPRQSLLVLVKDHGEPALT
ATATVLLSLEDSGQAPKASSRALSGAAGAETALVDVNVYLIIAICAVSSLLVLTLLLYMA
LRCSAPPSEGVCGPVKPRLVCSSAVGSWSYSQERRQRVCSGEGPPKTDLMAFSPSLPPCP
GSVANDPQASLDSSGKVGHSIFYLFIFVFHLEKYLNYLLRHIRMVFIHLS
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcgcaagtcaaggcaaacaagggaaccggaatctactactgctgtttgtcacc
ctcgcagcctgggagacagggagtggccaggttcgttattcagttatggaggaggccaaa
cacggcaccttcgtgggccacatcgcccaggacctaaggctggagctgcaagagctggtg
ccccgcttgttccagttggattccaaaggtcttggggatcttctggaggtaaatctgcag
aatggcattttgtttgtgaattctcggatcgaccgggaggagctgtgcgggcggagcgcg
gagtgcagcatccacttggaggtgatcgtggaccggccgctgcaggtgttccatgtggag
gtggaggtgaaggacattaacgacaatcctcctgtattcctggggacacaaaagaatctg
tttatcgctgaatccaggccgcttgactctcggtttccactagagggcgcctccgacgca
gatatcggggagaacgctctgttgacttacaggctgagctccagtgagtacttctctctg
gaggtaccaaccaccgaccaacaggtaaaacctctcagtcttgtgttacgcaaaccttta
gacagggaagaatctccggaacttcatttagtgctcacggccactgacagaggcaaacct
gagctgactggcaccgttcagttactcatcaatgtgctagacgtcaatgacaacactcca
gtttttgatagaacactctatgctgtgaaattagcagaaaacgtccctaatggaacgttg
gtaattaaacttaatgcctcagatgtagacgaaggcttgaatgcggatattatttattca
ttctctagtgacgcttctcctgatataaaatttaagttctacatagaccctgtaagtggg
gaaattacagttacaggacgcatcgattttgaagaaagaaaaacctacaaaatccgagta
gaggcgactgataaaggctacccacccctgactggtcactgtacagttctcgtggaagtt
ttggatactaatgacaatgctcctaagttgactatcaaaactctctggctcccggtcaaa
gaggatgcacagctggggacaatcatcgccctgatcagtgtgattgacggagatgaaggt
gaaaatggacaggtgacctgttctctgacgcctcatgtccccttcaagctagtgtccacc
ttcaagaattactattcgctggtcctggatagtgccttggatcgtgagagcgtagcgaac
tatgaagtagtggtgaccgcgagggacgggggctcacctccgttgtcggccaaggccagc
gtgtccgtggaggtggctgacgtgaacgacaacgcgcccgcgttcccgcagcccgagtac
acggtgttcgtgaaggagaacaactcgcccggctgccacatcttcacggtgtcggctcgg
gacgcggacgcgcaggagaacgcgctggtgtcctactcgctggtggagcggagggtgggc
gaccgcgcgctgtcgagctacgtgtcggtgcacgcggagagcggcaaagtgtacgcgctg
cagccgctggaccacgaggagctggagctgctgcagttccaggtgagcgcgcgcgacgcg
ggcgtgccgcccctgggcagcaacgtgacgctgcaggtgttcgtgctggacgagaacgac
aacgcgcctgcgctgctgccgcctgggccaggcggaggacccagcgcggtgagccaagtg
gtatccaggtccgtggacgcgggccacgtggtggcgaaggtgcgcgcggtggacgcggac
tcgggctacaacgcgtggctgtcgtacgagctgcagccggcggcgggtggcgcacgcagc
ccgttccgcgtggggctgtacaccggcgagatcagcaccacgcgcgccctggacgaggcg
gacgcgccgcgccagagcctgctggtgctggtgaaggaccacggcgagccggcgctgacg
gccacggccaccgtgctgctatcgctggaggacagcggccaggcgcccaaggcctcttcg
cgggcgttgtctggtgcagccggcgcagagacggcgttagtggatgtgaacgtgtacctg
atcatcgccatctgcgcggtgtccagcctgttggtgcttacactgctgctgtacatggcg
ctgcggtgctcggcgccgcccagtgaaggcgtgtgcgggccggtgaagcccaggctggtg
tgctccagcgctgtgggaagctggtcttactcgcaggagaggcgacagagggtgtgctct
ggggaggggccgcccaagaccgacctcatggccttcagccccagcctacctccgtgtcct
ggatctgtagccaatgatccacaggcttctttggactcctctggtaaggtgggtcattca
atattttatttgttcatttttgtattccatcttgaaaaatatcttaattatcttctaagg
catattagaatggttttcatccatttatcctag
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